Transcription factor | ETV6 (GeneCards) | ||||||||
Model | ETV6_HUMAN.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 9 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | dSAGGAARb | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | 0.853 | ||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | 3 | ||||||||
Aligned words | 500 | ||||||||
TF family | Ets-related factors {3.5.2} | ||||||||
TF subfamily | ETV6-like factors {3.5.2.6} | ||||||||
HGNC | HGNC:3495 | ||||||||
EntrezGene | GeneID:2120 (SSTAR profile) | ||||||||
UniProt ID | ETV6_HUMAN | ||||||||
UniProt AC | P41212 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ETV6 expression | ||||||||
ReMap ChIP-seq dataset list | ETV6 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 187.0 | 80.0 | 152.0 | 81.0 |
02 | 63.0 | 287.0 | 135.0 | 15.0 |
03 | 458.0 | 5.0 | 2.0 | 35.0 |
04 | 3.0 | 0.0 | 496.0 | 1.0 |
05 | 2.0 | 5.0 | 489.0 | 4.0 |
06 | 443.0 | 33.0 | 24.0 | 0.0 |
07 | 459.0 | 3.0 | 11.0 | 27.0 |
08 | 195.0 | 9.0 | 252.0 | 44.0 |
09 | 61.0 | 65.0 | 165.0 | 209.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.399 | -0.439 | 0.193 | -0.427 |
02 | -0.673 | 0.824 | 0.076 | -2.034 |
03 | 1.29 | -2.961 | -3.573 | -1.242 |
04 | -3.325 | -4.4 | 1.369 | -3.903 |
05 | -3.573 | -2.961 | 1.355 | -3.126 |
06 | 1.256 | -1.298 | -1.6 | -4.4 |
07 | 1.292 | -3.325 | -2.311 | -1.489 |
08 | 0.44 | -2.484 | 0.695 | -1.022 |
09 | -0.705 | -0.643 | 0.275 | 0.509 |