Model info
| Transcription factor | ETV7 (GeneCards) | ||||||||
| Model | ETV7_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 7 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vRGGAAR | ||||||||
| Best auROC (human) | 0.729 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | ETV6-like factors {3.5.2.6} | ||||||||
| HGNC | HGNC:18160 | ||||||||
| EntrezGene | GeneID:51513 (SSTAR profile) | ||||||||
| UniProt ID | ETV7_HUMAN | ||||||||
| UniProt AC | Q9Y603 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ETV7 expression | ||||||||
| ReMap ChIP-seq dataset list | ETV7 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 120.0 | 206.0 | 148.0 | 26.0 |
| 02 | 329.0 | 58.0 | 80.0 | 33.0 |
| 03 | 0.0 | 1.0 | 491.0 | 8.0 |
| 04 | 3.0 | 10.0 | 487.0 | 0.0 |
| 05 | 488.0 | 6.0 | 4.0 | 2.0 |
| 06 | 465.0 | 2.0 | 30.0 | 3.0 |
| 07 | 166.0 | 2.0 | 323.0 | 9.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.04 | 0.495 | 0.167 | -1.525 |
| 02 | 0.96 | -0.754 | -0.439 | -1.298 |
| 03 | -4.4 | -3.903 | 1.359 | -2.584 |
| 04 | -3.325 | -2.394 | 1.351 | -4.4 |
| 05 | 1.353 | -2.819 | -3.126 | -3.573 |
| 06 | 1.305 | -3.573 | -1.389 | -3.325 |
| 07 | 0.281 | -3.573 | 0.942 | -2.484 |