EVX2_MOUSE.H11DI.0.A motif - HOmo sapiens COmprehensive MOdel COllection

Check the newest release v13

Retracted!
Do not use this motif!

Model info

Transcription factor

Model

EVX2_MOUSE.H11DI.0.A RETRACTED!!!

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Data source

ChIP-Seq

Model release

HOCOMOCOv11

Model length

14

Quality

A

Motif rank

0

Consensus

nbbTTTATKGYhbb

Best auROC (human)

0.934

Best auROC (mouse)

0.971

Peak sets in benchmark (human)

11

Peak sets in benchmark (mouse)

4

Aligned words

250

TF family

HOX-related factors {3.1.1}

TF subfamily

EVX (Even-skipped homolog) {3.1.1.10}

MGI

EntrezGene

GeneID:14029
(SSTAR profile)

UniProt ID

UniProt AC

P49749
(TFClass)

Comment

Retracted motif!

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	8.73491
0.0005	11.12886
0.0001	15.756924999999999

GTEx tissue expression atlas

Evx2 expression

Motifs in JASPAR

MA0888.1 (EVX2; Homo sapiens)

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	8.0	12.0	35.0	21.0	7.0	8.0	9.0	16.0	8.0	13.0	25.0	20.0	10.0	14.0	25.0	8.0
02	5.0	17.0	3.0	8.0	12.0	6.0	8.0	21.0	15.0	12.0	16.0	51.0	6.0	10.0	21.0	28.0
03	0.0	0.0	1.0	37.0	0.0	3.0	0.0	42.0	0.0	0.0	1.0	47.0	0.0	1.0	5.0	102.0
04	0.0	0.0	0.0	0.0	0.0	1.0	0.0	3.0	0.0	0.0	0.0	7.0	4.0	1.0	0.0	223.0
05	0.0	0.0	1.0	3.0	1.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	3.0	0.0	10.0	220.0
06	4.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	11.0	0.0	0.0	0.0	224.0	0.0	0.0	0.0
07	0.0	10.0	0.0	229.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
08	0.0	0.0	0.0	0.0	3.0	0.0	5.0	2.0	0.0	0.0	0.0	0.0	6.0	5.0	118.0	100.0
09	2.0	0.0	7.0	0.0	5.0	0.0	0.0	0.0	66.0	0.0	57.0	0.0	26.0	0.0	76.0	0.0
10	0.0	77.0	10.0	12.0	0.0	0.0	0.0	0.0	5.0	110.0	12.0	13.0	0.0	0.0	0.0	0.0
11	0.0	2.0	1.0	2.0	29.0	83.0	3.0	72.0	1.0	9.0	3.0	9.0	4.0	7.0	5.0	9.0
12	0.0	12.0	18.0	4.0	14.0	49.0	3.0	35.0	1.0	7.0	1.0	3.0	8.0	21.0	32.0	31.0
13	1.0	7.0	4.0	11.0	20.0	26.0	5.0	38.0	3.0	15.0	18.0	18.0	15.0	16.0	16.0	26.0

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	-0.605	-0.213	0.839	0.334	-0.733	-0.605	-0.492	0.067	-0.605	-0.136	0.506	0.286	-0.39	-0.063	0.506	-0.605
02	-1.051	0.127	-1.52	-0.605	-0.213	-0.879	-0.605	0.334	0.004	-0.213	0.067	1.212	-0.879	-0.39	0.334	0.618
03	-3.799	-3.799	-2.432	0.894	-3.799	-1.52	-3.799	1.019	-3.799	-3.799	-2.432	1.131	-3.799	-2.432	-1.051	1.902
04	-3.799	-3.799	-3.799	-3.799	-3.799	-2.432	-3.799	-1.52	-3.799	-3.799	-3.799	-0.733	-1.258	-2.432	-3.799	2.682
05	-3.799	-3.799	-2.432	-1.52	-2.432	-3.799	-3.799	-2.432	-3.799	-3.799	-3.799	-3.799	-1.52	-3.799	-0.39	2.669
06	-1.258	-3.799	-3.799	-3.799	-3.799	-3.799	-3.799	-3.799	-0.298	-3.799	-3.799	-3.799	2.687	-3.799	-3.799	-3.799
07	-3.799	-0.39	-3.799	2.709	-3.799	-3.799	-3.799	-3.799	-3.799	-3.799	-3.799	-3.799	-3.799	-3.799	-3.799	-3.799
08	-3.799	-3.799	-3.799	-3.799	-1.52	-3.799	-1.051	-1.875	-3.799	-3.799	-3.799	-3.799	-0.879	-1.051	2.047	1.882
09	-1.875	-3.799	-0.733	-3.799	-1.051	-3.799	-3.799	-3.799	1.468	-3.799	1.323	-3.799	0.545	-3.799	1.609	-3.799
10	-3.799	1.622	-0.39	-0.213	-3.799	-3.799	-3.799	-3.799	-1.051	1.977	-0.213	-0.136	-3.799	-3.799	-3.799	-3.799
11	-3.799	-1.875	-2.432	-1.875	0.652	1.696	-1.52	1.555	-2.432	-0.492	-1.52	-0.492	-1.258	-0.733	-1.051	-0.492
12	-3.799	-0.213	0.183	-1.258	-0.063	1.172	-1.52	0.839	-2.432	-0.733	-2.432	-1.52	-0.605	0.334	0.75	0.718
13	-2.432	-0.733	-1.258	-0.298	0.286	0.545	-1.051	0.92	-1.52	0.004	0.183	0.183	0.004	0.067	0.067	0.545