We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFEV
(GeneCards)
ModelFEV_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
B
Motif rank
0
ConsensusvvvRGARRhS
Best auROC (human)0.753
Best auROC (mouse)0.887
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)4
Aligned words498
TF familyEts-related factors {3.5.2}
TF subfamilyEts-like factors {3.5.2.1}
HGNCHGNC:18562
EntrezGeneGeneID:54738
(SSTAR profile)
UniProt IDFEV_HUMAN
UniProt ACQ99581
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.966635
0.0005 5.50817
0.0001 6.51399
GTEx tissue expression atlas FEV expression
ReMap ChIP-seq dataset list FEV datasets
Motifs in JASPAR
PCM
ACGT
01112.0102.0259.025.0
02127.0264.067.040.0
03140.0160.0177.021.0
04158.06.0328.06.0
0516.03.0472.07.0
06482.011.02.03.0
07335.029.0125.09.0
0893.066.0300.039.0
0977.0193.044.0184.0
1036.0115.0291.056.0
PWM
ACGT
01-0.104-0.1970.726-1.558
020.020.745-0.609-1.11
030.1160.2480.348-1.721
040.236-2.8150.961-2.815
05-1.971-3.3211.324-2.69
061.344-2.307-3.569-3.321
070.982-1.4170.004-2.48
08-0.288-0.6240.872-1.134
09-0.4730.434-1.0180.387
10-1.211-0.0780.842-0.784