Check the newest release v12
Model info
Transcription factorFEV
(GeneCards)
ModelFEV_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
B
Motif rank
0
ConsensusvvvRGARRhS
Best auROC (human)0.753
Best auROC (mouse)0.887
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)4
Aligned words498
TF familyEts-related factors {3.5.2}
TF subfamilyEts-like factors {3.5.2.1}
HGNCHGNC:18562
EntrezGeneGeneID:54738
(SSTAR profile)
UniProt IDFEV_HUMAN
UniProt ACQ99581
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.966635
0.0005 5.50817
0.0001 6.51399
GTEx tissue expression atlas FEV expression
ReMap ChIP-seq dataset list FEV datasets
Motifs in JASPAR
PCM
ACGT
01112.0102.0259.025.0
02127.0264.067.040.0
03140.0160.0177.021.0
04158.06.0328.06.0
0516.03.0472.07.0
06482.011.02.03.0
07335.029.0125.09.0
0893.066.0300.039.0
0977.0193.044.0184.0
1036.0115.0291.056.0
PWM
ACGT
01-0.104-0.1970.726-1.558
020.020.745-0.609-1.11
030.1160.2480.348-1.721
040.236-2.8150.961-2.815
05-1.971-3.3211.324-2.69
061.344-2.307-3.569-3.321
070.982-1.4170.004-2.48
08-0.288-0.6240.872-1.134
09-0.4730.434-1.0180.387
10-1.211-0.0780.842-0.784