We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFEZF1
(GeneCards)
ModelFEZF1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusdhTGYYYWTTYh
Best auROC (human)0.801
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words500
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyFEZF factors {2.3.3.20}
HGNCHGNC:22788
EntrezGeneGeneID:389549
(SSTAR profile)
UniProt IDFEZF1_HUMAN
UniProt ACA0PJY2
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.896925
0.0005 6.700175
0.0001 8.33259
GTEx tissue expression atlas FEZF1 expression
ReMap ChIP-seq dataset list FEZF1 datasets
Motifs in JASPAR
PCM
ACGT
01153.061.0181.0105.0
0266.0243.037.0154.0
0335.016.011.0438.0
046.010.0475.09.0
057.0278.051.0164.0
0613.0217.026.0244.0
0731.0363.013.093.0
08120.030.07.0343.0
093.067.025.0405.0
1010.05.09.0476.0
1122.058.035.0385.0
1286.0166.079.0169.0
PWM
ACGT
010.2-0.7050.366-0.172
02-0.6280.659-1.1890.206
03-1.242-1.975-2.3111.245
04-2.819-2.3941.326-2.484
05-2.6940.793-0.8790.269
06-2.1630.546-1.5250.663
07-1.3581.058-2.163-0.291
08-0.04-1.389-2.6941.002
09-3.325-0.613-1.5611.167
10-2.394-2.961-2.4841.328
11-1.681-0.754-1.2421.117
12-0.3680.281-0.4520.298