Model info
| Transcription factor | FIGLA (GeneCards) | ||||||||
| Model | FIGLA_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dnhCAGGTGbd | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 159 | ||||||||
| TF family | Tal-related factors {1.2.3} | ||||||||
| TF subfamily | Twist-like factors {1.2.3.2} | ||||||||
| HGNC | HGNC:24669 | ||||||||
| EntrezGene | GeneID:344018 (SSTAR profile) | ||||||||
| UniProt ID | FIGLA_HUMAN | ||||||||
| UniProt AC | Q6QHK4 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | FIGLA expression | ||||||||
| ReMap ChIP-seq dataset list | FIGLA datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 33.75 | 20.75 | 44.75 | 59.75 |
| 02 | 56.5 | 28.5 | 25.5 | 48.5 |
| 03 | 72.0 | 54.0 | 14.0 | 19.0 |
| 04 | 8.75 | 141.75 | 2.75 | 5.75 |
| 05 | 154.0 | 1.0 | 3.0 | 1.0 |
| 06 | 3.0 | 8.0 | 144.0 | 4.0 |
| 07 | 0.0 | 24.0 | 130.0 | 5.0 |
| 08 | 4.0 | 0.0 | 2.0 | 153.0 |
| 09 | 3.75 | 2.75 | 147.75 | 4.75 |
| 10 | 12.5 | 15.5 | 58.5 | 72.5 |
| 11 | 37.75 | 14.75 | 22.75 | 83.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.158 | -0.622 | 0.115 | 0.397 |
| 02 | 0.342 | -0.321 | -0.427 | 0.193 |
| 03 | 0.58 | 0.298 | -0.988 | -0.705 |
| 04 | -1.41 | 1.249 | -2.323 | -1.766 |
| 05 | 1.331 | -2.895 | -2.263 | -2.895 |
| 06 | -2.263 | -1.488 | 1.265 | -2.052 |
| 07 | -3.477 | -0.484 | 1.163 | -1.879 |
| 08 | -2.052 | -3.477 | -2.53 | 1.325 |
| 09 | -2.101 | -2.323 | 1.29 | -1.919 |
| 10 | -1.092 | -0.895 | 0.376 | 0.587 |
| 11 | -0.05 | -0.94 | -0.535 | 0.729 |