Model info
| Transcription factor | FLI1 (GeneCards) | ||||||||
| Model | FLI1_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 18 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvdRRMAGGAAGbvRvvv | ||||||||
| Best auROC (human) | 0.987 | ||||||||
| Best auROC (mouse) | 0.892 | ||||||||
| Peak sets in benchmark (human) | 50 | ||||||||
| Peak sets in benchmark (mouse) | 32 | ||||||||
| Aligned words | 529 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
| HGNC | HGNC:3749 | ||||||||
| EntrezGene | GeneID:2313 (SSTAR profile) | ||||||||
| UniProt ID | FLI1_HUMAN | ||||||||
| UniProt AC | Q01543 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | FLI1 expression | ||||||||
| ReMap ChIP-seq dataset list | FLI1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 104.0 | 113.0 | 219.0 | 61.0 |
| 02 | 157.0 | 74.0 | 215.0 | 51.0 |
| 03 | 222.0 | 43.0 | 186.0 | 46.0 |
| 04 | 100.0 | 27.0 | 325.0 | 45.0 |
| 05 | 149.0 | 18.0 | 316.0 | 14.0 |
| 06 | 210.0 | 193.0 | 91.0 | 3.0 |
| 07 | 455.0 | 17.0 | 20.0 | 5.0 |
| 08 | 2.0 | 2.0 | 488.0 | 5.0 |
| 09 | 1.0 | 6.0 | 490.0 | 0.0 |
| 10 | 466.0 | 9.0 | 22.0 | 0.0 |
| 11 | 476.0 | 1.0 | 13.0 | 7.0 |
| 12 | 73.0 | 14.0 | 409.0 | 1.0 |
| 13 | 67.0 | 85.0 | 249.0 | 96.0 |
| 14 | 204.0 | 62.0 | 200.0 | 31.0 |
| 15 | 196.0 | 38.0 | 236.0 | 27.0 |
| 16 | 150.0 | 60.0 | 253.0 | 34.0 |
| 17 | 120.0 | 75.0 | 263.0 | 39.0 |
| 18 | 193.0 | 65.0 | 181.0 | 58.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.176 | -0.094 | 0.561 | -0.699 |
| 02 | 0.231 | -0.51 | 0.543 | -0.873 |
| 03 | 0.575 | -1.038 | 0.399 | -0.973 |
| 04 | -0.214 | -1.483 | 0.954 | -0.994 |
| 05 | 0.18 | -1.862 | 0.926 | -2.091 |
| 06 | 0.52 | 0.436 | -0.307 | -3.319 |
| 07 | 1.289 | -1.914 | -1.764 | -2.955 |
| 08 | -3.567 | -3.567 | 1.359 | -2.955 |
| 09 | -3.898 | -2.813 | 1.363 | -4.395 |
| 10 | 1.313 | -2.478 | -1.675 | -4.395 |
| 11 | 1.334 | -3.898 | -2.157 | -2.689 |
| 12 | -0.523 | -2.091 | 1.183 | -3.898 |
| 13 | -0.607 | -0.374 | 0.689 | -0.254 |
| 14 | 0.491 | -0.683 | 0.471 | -1.352 |
| 15 | 0.451 | -1.157 | 0.636 | -1.483 |
| 16 | 0.186 | -0.715 | 0.705 | -1.264 |
| 17 | -0.034 | -0.497 | 0.743 | -1.132 |
| 18 | 0.436 | -0.637 | 0.372 | -0.748 |