Model info
| Transcription factor | FLI1 (GeneCards) | ||||||||
| Model | FLI1_HUMAN.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | vdRSAGGAAGbvd | ||||||||
| Best auROC (human) | 0.986 | ||||||||
| Best auROC (mouse) | 0.953 | ||||||||
| Peak sets in benchmark (human) | 50 | ||||||||
| Peak sets in benchmark (mouse) | 32 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
| HGNC | HGNC:3749 | ||||||||
| EntrezGene | GeneID:2313 (SSTAR profile) | ||||||||
| UniProt ID | FLI1_HUMAN | ||||||||
| UniProt AC | Q01543 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | FLI1 expression | ||||||||
| ReMap ChIP-seq dataset list | FLI1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 188.0 | 74.0 | 174.0 | 64.0 |
| 02 | 163.0 | 42.0 | 249.0 | 46.0 |
| 03 | 226.0 | 9.0 | 242.0 | 23.0 |
| 04 | 84.0 | 275.0 | 136.0 | 5.0 |
| 05 | 409.0 | 80.0 | 6.0 | 5.0 |
| 06 | 1.0 | 1.0 | 497.0 | 1.0 |
| 07 | 5.0 | 2.0 | 492.0 | 1.0 |
| 08 | 493.0 | 3.0 | 2.0 | 2.0 |
| 09 | 482.0 | 2.0 | 4.0 | 12.0 |
| 10 | 122.0 | 3.0 | 370.0 | 5.0 |
| 11 | 51.0 | 148.0 | 109.0 | 192.0 |
| 12 | 133.0 | 98.0 | 214.0 | 55.0 |
| 13 | 123.0 | 54.0 | 252.0 | 71.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.404 | -0.516 | 0.327 | -0.658 |
| 02 | 0.263 | -1.067 | 0.683 | -0.979 |
| 03 | 0.587 | -2.484 | 0.655 | -1.64 |
| 04 | -0.392 | 0.782 | 0.083 | -2.961 |
| 05 | 1.177 | -0.439 | -2.819 | -2.961 |
| 06 | -3.903 | -3.903 | 1.371 | -3.903 |
| 07 | -2.961 | -3.573 | 1.361 | -3.903 |
| 08 | 1.363 | -3.325 | -3.573 | -3.573 |
| 09 | 1.34 | -3.573 | -3.126 | -2.234 |
| 10 | -0.024 | -3.325 | 1.077 | -2.961 |
| 11 | -0.879 | 0.167 | -0.135 | 0.425 |
| 12 | 0.061 | -0.24 | 0.533 | -0.805 |
| 13 | -0.016 | -0.823 | 0.695 | -0.556 |