Model info
| Transcription factor | Fli1 | ||||||||
| Model | FLI1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvvdSMGGAAGbvv | ||||||||
| Best auROC (human) | 0.953 | ||||||||
| Best auROC (mouse) | 0.958 | ||||||||
| Peak sets in benchmark (human) | 50 | ||||||||
| Peak sets in benchmark (mouse) | 32 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
| MGI | MGI:95554 | ||||||||
| EntrezGene | GeneID:14247 (SSTAR profile) | ||||||||
| UniProt ID | FLI1_MOUSE | ||||||||
| UniProt AC | P26323 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Fli1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 59.0 | 131.0 | 277.0 | 33.0 |
| 02 | 101.0 | 115.0 | 242.0 | 42.0 |
| 03 | 122.0 | 130.0 | 200.0 | 48.0 |
| 04 | 168.0 | 43.0 | 237.0 | 52.0 |
| 05 | 27.0 | 330.0 | 134.0 | 9.0 |
| 06 | 142.0 | 326.0 | 23.0 | 9.0 |
| 07 | 5.0 | 4.0 | 489.0 | 2.0 |
| 08 | 5.0 | 0.0 | 489.0 | 6.0 |
| 09 | 493.0 | 3.0 | 0.0 | 4.0 |
| 10 | 484.0 | 1.0 | 6.0 | 9.0 |
| 11 | 84.0 | 4.0 | 409.0 | 3.0 |
| 12 | 51.0 | 189.0 | 60.0 | 200.0 |
| 13 | 71.0 | 71.0 | 327.0 | 31.0 |
| 14 | 97.0 | 129.0 | 250.0 | 24.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.737 | 0.046 | 0.789 | -1.298 |
| 02 | -0.21 | -0.082 | 0.655 | -1.067 |
| 03 | -0.024 | 0.039 | 0.465 | -0.938 |
| 04 | 0.293 | -1.044 | 0.634 | -0.86 |
| 05 | -1.489 | 0.963 | 0.069 | -2.484 |
| 06 | 0.126 | 0.951 | -1.64 | -2.484 |
| 07 | -2.961 | -3.126 | 1.355 | -3.573 |
| 08 | -2.961 | -4.4 | 1.355 | -2.819 |
| 09 | 1.363 | -3.325 | -4.4 | -3.126 |
| 10 | 1.345 | -3.903 | -2.819 | -2.484 |
| 11 | -0.392 | -3.126 | 1.177 | -3.325 |
| 12 | -0.879 | 0.409 | -0.721 | 0.465 |
| 13 | -0.556 | -0.556 | 0.954 | -1.358 |
| 14 | -0.25 | 0.031 | 0.687 | -1.6 |