Model info
| Transcription factor | Fli1 | ||||||||
| Model | FLI1_MOUSE.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 19 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | vvvvvRSAGGAAGbvvvvv | ||||||||
| Best auROC (human) | 0.983 | ||||||||
| Best auROC (mouse) | 0.939 | ||||||||
| Peak sets in benchmark (human) | 50 | ||||||||
| Peak sets in benchmark (mouse) | 32 | ||||||||
| Aligned words | 515 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
| MGI | MGI:95554 | ||||||||
| EntrezGene | GeneID:14247 (SSTAR profile) | ||||||||
| UniProt ID | FLI1_MOUSE | ||||||||
| UniProt AC | P26323 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Fli1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 86.0 | 130.0 | 243.0 | 41.0 |
| 02 | 146.0 | 94.0 | 217.0 | 43.0 |
| 03 | 139.0 | 82.0 | 248.0 | 31.0 |
| 04 | 215.0 | 83.0 | 179.0 | 23.0 |
| 05 | 157.0 | 46.0 | 261.0 | 36.0 |
| 06 | 183.0 | 9.0 | 281.0 | 27.0 |
| 07 | 112.0 | 246.0 | 137.0 | 5.0 |
| 08 | 397.0 | 90.0 | 7.0 | 6.0 |
| 09 | 3.0 | 0.0 | 492.0 | 5.0 |
| 10 | 9.0 | 4.0 | 484.0 | 3.0 |
| 11 | 485.0 | 7.0 | 7.0 | 1.0 |
| 12 | 487.0 | 0.0 | 9.0 | 4.0 |
| 13 | 78.0 | 3.0 | 417.0 | 2.0 |
| 14 | 33.0 | 122.0 | 215.0 | 130.0 |
| 15 | 188.0 | 57.0 | 217.0 | 38.0 |
| 16 | 195.0 | 62.0 | 213.0 | 30.0 |
| 17 | 156.0 | 70.0 | 231.0 | 43.0 |
| 18 | 125.0 | 93.0 | 221.0 | 61.0 |
| 19 | 166.0 | 97.0 | 186.0 | 51.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.368 | 0.039 | 0.659 | -1.09 |
| 02 | 0.154 | -0.281 | 0.546 | -1.044 |
| 03 | 0.105 | -0.415 | 0.679 | -1.358 |
| 04 | 0.537 | -0.403 | 0.355 | -1.64 |
| 05 | 0.225 | -0.979 | 0.73 | -1.215 |
| 06 | 0.377 | -2.484 | 0.803 | -1.489 |
| 07 | -0.108 | 0.671 | 0.091 | -2.961 |
| 08 | 1.147 | -0.324 | -2.694 | -2.819 |
| 09 | -3.325 | -4.4 | 1.361 | -2.961 |
| 10 | -2.484 | -3.126 | 1.345 | -3.325 |
| 11 | 1.347 | -2.694 | -2.694 | -3.903 |
| 12 | 1.351 | -4.4 | -2.484 | -3.126 |
| 13 | -0.464 | -3.325 | 1.196 | -3.573 |
| 14 | -1.298 | -0.024 | 0.537 | 0.039 |
| 15 | 0.404 | -0.771 | 0.546 | -1.163 |
| 16 | 0.44 | -0.689 | 0.528 | -1.389 |
| 17 | 0.219 | -0.57 | 0.608 | -1.044 |
| 18 | 0.0 | -0.291 | 0.565 | -0.705 |
| 19 | 0.281 | -0.25 | 0.393 | -0.879 |