Transcription factor | FOSB (GeneCards) | ||||||||
Model | FOSB_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 10 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | nWKAGYCAbn | ||||||||
Best auROC (human) | 0.967 | ||||||||
Best auROC (mouse) | 0.92 | ||||||||
Peak sets in benchmark (human) | 2 | ||||||||
Peak sets in benchmark (mouse) | 27 | ||||||||
Aligned words | 485 | ||||||||
TF family | Fos-related factors {1.1.2} | ||||||||
TF subfamily | Fos factors {1.1.2.1} | ||||||||
HGNC | HGNC:3797 | ||||||||
EntrezGene | GeneID:2354 (SSTAR profile) | ||||||||
UniProt ID | FOSB_HUMAN | ||||||||
UniProt AC | P53539 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | FOSB expression | ||||||||
ReMap ChIP-seq dataset list | FOSB datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 4.0 | 2.0 | 13.0 | 141.0 | 16.0 | 3.0 | 6.0 | 58.0 | 23.0 | 5.0 | 16.0 | 97.0 | 13.0 | 3.0 | 21.0 | 60.0 |
02 | 3.0 | 12.0 | 40.0 | 1.0 | 2.0 | 1.0 | 6.0 | 4.0 | 7.0 | 4.0 | 40.0 | 5.0 | 16.0 | 17.0 | 274.0 | 49.0 |
03 | 22.0 | 0.0 | 0.0 | 6.0 | 26.0 | 1.0 | 0.0 | 7.0 | 307.0 | 16.0 | 3.0 | 34.0 | 42.0 | 0.0 | 2.0 | 15.0 |
04 | 4.0 | 0.0 | 316.0 | 77.0 | 0.0 | 0.0 | 6.0 | 11.0 | 0.0 | 0.0 | 4.0 | 1.0 | 0.0 | 0.0 | 60.0 | 2.0 |
05 | 1.0 | 0.0 | 1.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 31.0 | 70.0 | 28.0 | 257.0 | 6.0 | 2.0 | 10.0 | 73.0 |
06 | 19.0 | 19.0 | 0.0 | 0.0 | 7.0 | 59.0 | 6.0 | 0.0 | 3.0 | 35.0 | 1.0 | 0.0 | 33.0 | 289.0 | 2.0 | 8.0 |
07 | 59.0 | 1.0 | 2.0 | 0.0 | 379.0 | 2.0 | 16.0 | 5.0 | 7.0 | 0.0 | 2.0 | 0.0 | 4.0 | 3.0 | 0.0 | 1.0 |
08 | 42.0 | 139.0 | 97.0 | 171.0 | 2.0 | 0.0 | 0.0 | 4.0 | 0.0 | 8.0 | 11.0 | 1.0 | 1.0 | 2.0 | 1.0 | 2.0 |
09 | 13.0 | 11.0 | 11.0 | 10.0 | 66.0 | 29.0 | 5.0 | 49.0 | 50.0 | 34.0 | 14.0 | 11.0 | 52.0 | 45.0 | 38.0 | 43.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -1.938 | -2.546 | -0.822 | 1.535 | -0.62 | -2.196 | -1.562 | 0.651 | -0.264 | -1.732 | -0.62 | 1.163 | -0.822 | -2.196 | -0.353 | 0.685 |
02 | -2.196 | -0.899 | 0.282 | -3.09 | -2.546 | -3.09 | -1.562 | -1.938 | -1.416 | -1.938 | 0.282 | -1.732 | -0.62 | -0.56 | 2.198 | 0.484 |
03 | -0.308 | -4.368 | -4.368 | -1.562 | -0.143 | -3.09 | -4.368 | -1.416 | 2.312 | -0.62 | -2.196 | 0.122 | 0.331 | -4.368 | -2.546 | -0.683 |
04 | -1.938 | -4.368 | 2.341 | 0.933 | -4.368 | -4.368 | -1.562 | -0.984 | -4.368 | -4.368 | -1.938 | -3.09 | -4.368 | -4.368 | 0.685 | -2.546 |
05 | -3.09 | -4.368 | -3.09 | -2.546 | -4.368 | -4.368 | -4.368 | -4.368 | 0.03 | 0.838 | -0.07 | 2.135 | -1.562 | -2.546 | -1.076 | 0.88 |
06 | -0.451 | -0.451 | -4.368 | -4.368 | -1.416 | 0.668 | -1.562 | -4.368 | -2.196 | 0.15 | -3.09 | -4.368 | 0.092 | 2.252 | -2.546 | -1.289 |
07 | 0.668 | -3.09 | -2.546 | -4.368 | 2.523 | -2.546 | -0.62 | -1.732 | -1.416 | -4.368 | -2.546 | -4.368 | -1.938 | -2.196 | -4.368 | -3.09 |
08 | 0.331 | 1.521 | 1.163 | 1.728 | -2.546 | -4.368 | -4.368 | -1.938 | -4.368 | -1.289 | -0.984 | -3.09 | -3.09 | -2.546 | -3.09 | -2.546 |
09 | -0.822 | -0.984 | -0.984 | -1.076 | 0.779 | -0.036 | -1.732 | 0.484 | 0.504 | 0.122 | -0.75 | -0.984 | 0.543 | 0.399 | 0.232 | 0.354 |