We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOSB
(GeneCards)
ModelFOSB_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusnWKAGYCAbn
Best auROC (human)0.967
Best auROC (mouse)0.92
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)27
Aligned words485
TF familyFos-related factors {1.1.2}
TF subfamilyFos factors {1.1.2.1}
HGNCHGNC:3797
EntrezGeneGeneID:2354
(SSTAR profile)
UniProt IDFOSB_HUMAN
UniProt ACP53539
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.565815
0.0005 12.033635
0.0001 14.287105
GTEx tissue expression atlas FOSB expression
ReMap ChIP-seq dataset list FOSB datasets
Motifs in JASPAR
MA1127.1 (FOSB::JUN; Homo sapiens)
MA1135.1 (FOSB::JUNB; Homo sapiens)
MA1136.1 (FOSB::JUNB(var.2); Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
014.02.013.0141.016.03.06.058.023.05.016.097.013.03.021.060.0
023.012.040.01.02.01.06.04.07.04.040.05.016.017.0274.049.0
0322.00.00.06.026.01.00.07.0307.016.03.034.042.00.02.015.0
044.00.0316.077.00.00.06.011.00.00.04.01.00.00.060.02.0
051.00.01.02.00.00.00.00.031.070.028.0257.06.02.010.073.0
0619.019.00.00.07.059.06.00.03.035.01.00.033.0289.02.08.0
0759.01.02.00.0379.02.016.05.07.00.02.00.04.03.00.01.0
0842.0139.097.0171.02.00.00.04.00.08.011.01.01.02.01.02.0
0913.011.011.010.066.029.05.049.050.034.014.011.052.045.038.043.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.938-2.546-0.8221.535-0.62-2.196-1.5620.651-0.264-1.732-0.621.163-0.822-2.196-0.3530.685
02-2.196-0.8990.282-3.09-2.546-3.09-1.562-1.938-1.416-1.9380.282-1.732-0.62-0.562.1980.484
03-0.308-4.368-4.368-1.562-0.143-3.09-4.368-1.4162.312-0.62-2.1960.1220.331-4.368-2.546-0.683
04-1.938-4.3682.3410.933-4.368-4.368-1.562-0.984-4.368-4.368-1.938-3.09-4.368-4.3680.685-2.546
05-3.09-4.368-3.09-2.546-4.368-4.368-4.368-4.3680.030.838-0.072.135-1.562-2.546-1.0760.88
06-0.451-0.451-4.368-4.368-1.4160.668-1.562-4.368-2.1960.15-3.09-4.3680.0922.252-2.546-1.289
070.668-3.09-2.546-4.3682.523-2.546-0.62-1.732-1.416-4.368-2.546-4.368-1.938-2.196-4.368-3.09
080.3311.5211.1631.728-2.546-4.368-4.368-1.938-4.368-1.289-0.984-3.09-3.09-2.546-3.09-2.546
09-0.822-0.984-0.984-1.0760.779-0.036-1.7320.4840.5040.122-0.75-0.9840.5430.3990.2320.354