We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOSB
(GeneCards)
ModelFOSB_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
0
ConsensusvTGAGTCAb
Best auROC (human)0.974
Best auROC (mouse)0.917
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)27
Aligned words500
TF familyFos-related factors {1.1.2}
TF subfamilyFos factors {1.1.2.1}
HGNCHGNC:3797
EntrezGeneGeneID:2354
(SSTAR profile)
UniProt IDFOSB_HUMAN
UniProt ACP53539
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.0159400000000005
0.0005 5.8396550000000005
0.0001 7.765155
GTEx tissue expression atlas FOSB expression
ReMap ChIP-seq dataset list FOSB datasets
Motifs in JASPAR
PCM
ACGT
01207.0103.0146.044.0
025.06.01.0488.0
036.07.0459.028.0
04448.06.09.037.0
05102.00.0398.00.0
069.015.053.0423.0
0727.0452.014.07.0
08483.05.03.09.0
0936.0165.0115.0184.0
PWM
ACGT
010.5-0.1910.154-1.022
02-2.961-2.819-3.9031.353
03-2.819-2.6941.292-1.454
041.268-2.819-2.484-1.189
05-0.201-4.41.15-4.4
06-2.484-2.034-0.8411.21
07-1.4891.276-2.096-2.694
081.343-2.961-3.325-2.484
09-1.2150.275-0.0820.383