We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOSL1
(GeneCards)
ModelFOSL1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusddvTGAGTCAbh
Best auROC (human)0.988
Best auROC (mouse)0.952
Peak sets in benchmark (human)21
Peak sets in benchmark (mouse)2
Aligned words500
TF familyFos-related factors {1.1.2}
TF subfamilyFos factors {1.1.2.1}
HGNCHGNC:13718
EntrezGeneGeneID:8061
(SSTAR profile)
UniProt IDFOSL1_HUMAN
UniProt ACP15407
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.3954649999999997
0.0005 4.617165
0.0001 7.2456
GTEx tissue expression atlas FOSL1 expression
ReMap ChIP-seq dataset list FOSL1 datasets
Motifs in JASPAR
MA0477.1 (FOSL1; Homo sapiens)
MA1128.1 (FOSL1::JUN; Homo sapiens)
MA1129.1 (FOSL1::JUN(var.2); Homo sapiens)
MA1137.1 (FOSL1::JUNB; Homo sapiens)
MA1142.1 (FOSL1::JUND; Homo sapiens)
MA1143.1 (FOSL1::JUND(var.2); Homo sapiens)
PCM
ACGT
0199.093.0203.0105.0
02159.082.0174.085.0
03215.0135.0141.09.0
040.00.03.0497.0
050.02.0471.027.0
06494.01.01.04.0
0739.00.0461.00.0
080.00.00.0500.0
099.0490.01.00.0
10498.02.00.00.0
1111.0206.081.0202.0
12105.0201.077.0117.0
PWM
ACGT
01-0.23-0.2910.48-0.172
020.238-0.4150.327-0.38
030.5370.0760.119-2.484
04-4.4-4.4-3.3251.371
05-4.4-3.5731.317-1.489
061.365-3.903-3.903-3.126
07-1.138-4.41.296-4.4
08-4.4-4.4-4.41.377
09-2.4841.357-3.903-4.4
101.373-3.573-4.4-4.4
11-2.3110.495-0.4270.475
12-0.1720.47-0.477-0.065