We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOS
(GeneCards)
ModelFOS_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
0
ConsensusvTGAGTCAb
Best auROC (human)0.993
Best auROC (mouse)0.929
Peak sets in benchmark (human)38
Peak sets in benchmark (mouse)50
Aligned words500
TF familyFos-related factors {1.1.2}
TF subfamilyFos factors {1.1.2.1}
HGNCHGNC:3796
EntrezGeneGeneID:2353
(SSTAR profile)
UniProt IDFOS_HUMAN
UniProt ACP01100
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.56737
0.0005 5.80452
0.0001 7.443440000000001
GTEx tissue expression atlas FOS expression
ReMap ChIP-seq dataset list FOS datasets
Motifs in JASPAR
MA0099.1 (JUN::FOS; Mus musculus)
MA0099.2 (FOS::JUN; Mus musculus/Rattus norvegicus/Homo sapiens)
MA0476.1 (FOS; Homo sapiens)
MA0099.3 (FOS::JUN; Homo sapiens)
MA1126.1 (FOS::JUN(var.2); Homo sapiens)
MA1134.1 (FOS::JUNB; Homo sapiens)
MA1141.1 (FOS::JUND; Homo sapiens)
PCM
ACGT
01173.0108.0180.039.0
025.09.05.0481.0
038.017.0430.045.0
04468.04.014.014.0
0558.00.0442.00.0
0611.013.012.0464.0
0721.0467.012.00.0
08480.08.06.06.0
0914.0209.0132.0145.0
PWM
ACGT
010.322-0.1440.361-1.138
02-2.961-2.484-2.9611.338
03-2.584-1.921.227-1.0
041.311-3.126-2.096-2.096
05-0.754-4.41.254-4.4
06-2.311-2.163-2.2341.303
07-1.7251.309-2.234-4.4
081.336-2.584-2.819-2.819
09-2.0960.5090.0540.147