FOS_MOUSE.H11MO.0.A motif - HOmo sapiens COmprehensive MOdel COllection

Check the newest release v12

Model info

Transcription factor

Model

FOS_MOUSE.H11MO.0.A

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

ChIP-Seq

Model release

HOCOMOCOv11

Model length

12

Quality

A

Motif rank

0

Consensus

vdRTGAGTCAYh

Best auROC (human)

0.993

Best auROC (mouse)

0.927

Peak sets in benchmark (human)

38

Peak sets in benchmark (mouse)

50

Aligned words

500

TF family

Fos-related factors {1.1.2}

TF subfamily

Fos factors {1.1.2.1}

MGI

EntrezGene

GeneID:14281
(SSTAR profile)

UniProt ID

UniProt AC

P01101
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	2.6263449999999997
0.0005	4.37012
0.0001	6.470055

GTEx tissue expression atlas

Motifs in JASPAR

MA0099.1 (JUN::FOS; Mus musculus)

MA0099.2 (FOS::JUN; Mus musculus/Rattus norvegicus/Homo sapiens)

MA0476.1 (FOS; Homo sapiens)

MA0099.3 (FOS::JUN; Homo sapiens)

MA1126.1 (FOS::JUN(var.2); Homo sapiens)

MA1134.1 (FOS::JUNB; Homo sapiens)

MA1141.1 (FOS::JUND; Homo sapiens)

PCM

	A	C	G	T
01	95.0	105.0	206.0	94.0
02	119.0	69.0	194.0	118.0
03	239.0	73.0	187.0	1.0
04	0.0	1.0	0.0	499.0
05	0.0	0.0	492.0	8.0
06	495.0	1.0	0.0	4.0
07	0.0	0.0	489.0	11.0
08	0.0	1.0	0.0	499.0
09	3.0	497.0	0.0	0.0
10	500.0	0.0	0.0	0.0
11	3.0	184.0	62.0	251.0
12	107.0	219.0	83.0	91.0

PWM

	A	C	G	T
01	-0.271	-0.172	0.495	-0.281
02	-0.049	-0.584	0.435	-0.057
03	0.642	-0.529	0.399	-3.903
04	-4.4	-3.903	-4.4	1.375
05	-4.4	-4.4	1.361	-2.584
06	1.367	-3.903	-4.4	-3.126
07	-4.4	-4.4	1.355	-2.311
08	-4.4	-3.903	-4.4	1.375
09	-3.325	1.371	-4.4	-4.4
10	1.377	-4.4	-4.4	-4.4
11	-3.325	0.383	-0.689	0.691
12	-0.153	0.555	-0.403	-0.313