We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFoxa3
ModelFOXA3_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnbbhTGTTTACWYWdn
Best auROC (human)
Best auROC (mouse)0.993
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)6
Aligned words515
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXA {3.3.1.1}
MGIMGI:1347477
EntrezGeneGeneID:15377
(SSTAR profile)
UniProt IDFOXA3_MOUSE
UniProt ACP35584
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.38101
0.0005 11.47921
0.0001 15.881260000000001
GTEx tissue expression atlas Foxa3 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0113.021.024.018.017.054.06.036.013.076.030.043.09.066.032.039.0
028.022.018.04.058.094.08.057.02.049.030.011.07.063.043.023.0
0338.019.012.06.057.024.04.0143.012.040.012.035.09.027.09.050.0
042.00.03.0111.02.00.00.0108.00.00.00.037.01.00.08.0225.0
051.00.04.00.00.00.00.00.00.01.010.00.0125.00.0349.07.0
060.01.00.0125.01.00.00.00.03.00.02.0358.01.00.00.06.0
071.00.01.03.00.00.00.01.00.01.00.01.01.02.017.0469.0
080.00.00.02.01.00.00.02.00.00.00.018.02.01.0124.0347.0
091.01.01.00.00.00.00.01.0122.00.02.00.0308.04.041.016.0
101.0395.09.026.00.03.00.02.02.025.00.017.01.04.04.08.0
111.03.00.00.0181.060.05.0181.02.01.01.09.07.05.00.041.0
1234.050.028.079.02.020.01.046.00.00.01.05.07.039.020.0165.0
1320.02.06.015.064.01.02.042.029.00.02.019.099.05.016.0175.0
1461.019.0114.018.00.04.02.02.00.012.013.01.021.019.0145.066.0
1510.018.032.022.019.012.05.018.033.074.0113.054.013.026.020.028.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.854-0.386-0.254-0.537-0.5930.548-1.5940.146-0.8540.887-0.0340.322-1.2090.7470.0290.225
02-1.322-0.34-0.537-1.970.6191.099-1.3220.601-2.5780.451-0.034-1.016-1.4490.7010.322-0.296
030.199-0.484-0.932-1.5940.601-0.254-1.971.517-0.9320.25-0.9320.118-1.209-0.138-1.2090.471
04-2.578-4.395-2.2281.265-2.578-4.395-4.3951.237-4.395-4.395-4.3950.173-3.121-4.395-1.3221.969
05-3.121-4.395-1.97-4.395-4.395-4.395-4.395-4.395-4.395-3.121-1.108-4.3951.383-4.3952.408-1.449
06-4.395-3.121-4.3951.383-3.121-4.395-4.395-4.395-2.228-4.395-2.5782.433-3.121-4.395-4.395-1.594
07-3.121-4.395-3.121-2.228-4.395-4.395-4.395-3.121-4.395-3.121-4.395-3.121-3.121-2.578-0.5932.703
08-4.395-4.395-4.395-2.578-3.121-4.395-4.395-2.578-4.395-4.395-4.395-0.537-2.578-3.1211.3752.402
09-3.121-3.121-3.121-4.395-4.395-4.395-4.395-3.1211.359-4.395-2.578-4.3952.283-1.970.275-0.652
10-3.1212.531-1.209-0.176-4.395-2.228-4.395-2.578-2.578-0.214-4.395-0.593-3.121-1.97-1.97-1.322
11-3.121-2.228-4.395-4.3951.7520.652-1.7641.752-2.578-3.121-3.121-1.209-1.449-1.764-4.3950.275
120.0890.471-0.1020.926-2.578-0.433-3.1210.389-4.395-4.395-3.121-1.764-1.4490.225-0.4331.66
13-0.433-2.578-1.594-0.7150.717-3.121-2.5780.298-0.068-4.395-2.578-0.4841.151-1.764-0.6521.719
140.669-0.4841.291-0.537-4.395-1.97-2.578-2.578-4.395-0.932-0.854-3.121-0.386-0.4841.5310.747
15-1.108-0.5370.029-0.34-0.484-0.932-1.764-0.5370.060.8611.2820.548-0.854-0.176-0.433-0.102