Model info
| Transcription factor | Foxa3 | ||||||||
| Model | FOXA3_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bhTGTTTACWbWd | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.988 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 6 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
| TF subfamily | FOXA {3.3.1.1} | ||||||||
| MGI | MGI:1347477 | ||||||||
| EntrezGene | GeneID:15377 (SSTAR profile) | ||||||||
| UniProt ID | FOXA3_MOUSE | ||||||||
| UniProt AC | P35584 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Foxa3 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 79.0 | 233.0 | 108.0 | 80.0 |
| 02 | 114.0 | 125.0 | 39.0 | 222.0 |
| 03 | 6.0 | 0.0 | 3.0 | 491.0 |
| 04 | 123.0 | 4.0 | 369.0 | 4.0 |
| 05 | 4.0 | 11.0 | 7.0 | 478.0 |
| 06 | 3.0 | 0.0 | 18.0 | 479.0 |
| 07 | 4.0 | 0.0 | 136.0 | 360.0 |
| 08 | 428.0 | 3.0 | 57.0 | 12.0 |
| 09 | 2.0 | 437.0 | 11.0 | 50.0 |
| 10 | 184.0 | 76.0 | 4.0 | 236.0 |
| 11 | 47.0 | 116.0 | 53.0 | 284.0 |
| 12 | 213.0 | 7.0 | 27.0 | 253.0 |
| 13 | 77.0 | 58.0 | 289.0 | 76.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.452 | 0.617 | -0.144 | -0.439 |
| 02 | -0.091 | 0.0 | -1.138 | 0.569 |
| 03 | -2.819 | -4.4 | -3.325 | 1.359 |
| 04 | -0.016 | -3.126 | 1.074 | -3.126 |
| 05 | -3.126 | -2.311 | -2.694 | 1.332 |
| 06 | -3.325 | -4.4 | -1.868 | 1.334 |
| 07 | -3.126 | -4.4 | 0.083 | 1.05 |
| 08 | 1.222 | -3.325 | -0.771 | -2.234 |
| 09 | -3.573 | 1.243 | -2.311 | -0.898 |
| 10 | 0.383 | -0.49 | -3.126 | 0.63 |
| 11 | -0.958 | -0.074 | -0.841 | 0.814 |
| 12 | 0.528 | -2.694 | -1.489 | 0.699 |
| 13 | -0.477 | -0.754 | 0.831 | -0.49 |