We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXB1
(GeneCards)
ModelFOXB1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusdbvWWTATTTACATWRb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words6619
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXB {3.3.1.2}
HGNCHGNC:3799
EntrezGeneGeneID:27023
(SSTAR profile)
UniProt IDFOXB1_HUMAN
UniProt ACQ99853
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.1211599999999997
0.0005 4.42226
0.0001 7.1109100000000005
GTEx tissue expression atlas FOXB1 expression
ReMap ChIP-seq dataset list FOXB1 datasets
Motifs in JASPAR
MA0845.1 (FOXB1; Homo sapiens)
PCM
ACGT
011543.2441144.442974.011376.064
02628.2891012.9031588.7973807.769
032490.6782702.9841133.756710.34
045652.035387.264397.52600.938
055096.696579.613210.8971150.552
0624.35923.504113.2486876.647
074551.0586.6242463.19616.88
0894.4444.70165.3846873.228
0994.0171.709188.8886753.143
1020.7263.6321966.0215047.378
116756.5623.419270.0857.692
1222.0086315.32475.855624.571
135453.78799.786235.6831248.501
14216.881011.75211.7525597.376
155050.369119.444306.6231561.321
164037.978442.0931804.483753.203
17872.0072513.712302.2581349.783
PWM
ACGT
01-0.131-0.4290.524-0.245
02-1.027-0.551-0.1020.771
030.3470.429-0.439-0.905
041.166-1.509-1.483-1.072
051.063-1.108-2.112-0.424
06-4.194-4.227-2.7251.362
070.95-5.2950.336-4.525
08-2.903-5.54-3.261.362
09-2.907-6.107-2.2211.344
10-4.341-5.7080.1111.053
111.345-5.745-1.867-5.181
12-4.2871.277-3.116-1.033
131.13-2.849-2.002-0.343
14-2.085-0.552-2.1081.156
151.054-2.673-1.741-0.119
160.83-1.3770.025-0.847
17-0.7010.3560.269-0.265