We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXD1
(GeneCards)
ModelFOXD1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
D
Motif rank
0
ConsensusnhhTSTTTAChWhvR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words22
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXD {3.3.1.4}
HGNCHGNC:3802
EntrezGeneGeneID:2297
(SSTAR profile)
UniProt IDFOXD1_HUMAN
UniProt ACQ16676
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.5050099999999995
0.0005 6.23441
0.0001 7.744810000000001
GTEx tissue expression atlas FOXD1 expression
ReMap ChIP-seq dataset list FOXD1 datasets
Motifs in JASPAR
PCM
ACGT
012.62712.5022.6274.244
028.3172.4251.6179.642
037.7963.7542.1378.313
040.8080.8081.61718.767
050.8085.36715.0170.808
060.8080.8080.80819.575
070.00.00.80821.192
080.00.00.80821.192
0920.3830.00.8080.808
100.018.7672.4250.808
116.75.3671.6178.317
124.5591.6170.015.825
139.9334.5591.6175.892
149.3585.3674.852.425
155.7715.25410.5710.404
PWM
ACGT
01-0.6130.75-0.613-0.223
020.371-0.674-0.9650.507
030.312-0.326-0.7680.37
04-1.378-1.378-0.9651.136
05-1.378-0.0210.923-1.378
06-1.378-1.378-1.3781.177
07-2.094-2.094-1.3781.253
08-2.094-2.094-1.3781.253
091.216-2.094-1.378-1.378
10-2.0941.136-0.674-1.378
110.175-0.021-0.9650.371
12-0.163-0.965-2.0940.973
130.535-0.163-0.9650.061
140.479-0.021-0.109-0.674
150.042-0.040.592-1.673