Model info
| Transcription factor | FOXD2 (GeneCards) | ||||||||
| Model | FOXD2_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 19 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | WRdRTMAATRTTWWYdTAR | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 968 | ||||||||
| TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
| TF subfamily | FOXD {3.3.1.4} | ||||||||
| HGNC | HGNC:3803 | ||||||||
| EntrezGene | GeneID:2306 (SSTAR profile) | ||||||||
| UniProt ID | FOXD2_HUMAN | ||||||||
| UniProt AC | O60548 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | FOXD2 expression | ||||||||
| ReMap ChIP-seq dataset list | FOXD2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 283.0 | 73.0 | 72.0 | 540.0 |
| 02 | 573.25 | 70.25 | 240.25 | 84.25 |
| 03 | 326.0 | 128.0 | 152.0 | 362.0 |
| 04 | 221.75 | 72.75 | 610.75 | 62.75 |
| 05 | 93.0 | 46.0 | 1.0 | 828.0 |
| 06 | 716.0 | 163.0 | 1.0 | 88.0 |
| 07 | 957.0 | 4.0 | 0.0 | 7.0 |
| 08 | 951.0 | 2.0 | 0.0 | 15.0 |
| 09 | 0.0 | 176.0 | 0.0 | 792.0 |
| 10 | 508.0 | 0.0 | 459.0 | 1.0 |
| 11 | 0.0 | 0.0 | 5.0 | 963.0 |
| 12 | 0.0 | 0.0 | 0.0 | 968.0 |
| 13 | 425.0 | 0.0 | 58.0 | 485.0 |
| 14 | 406.0 | 0.0 | 162.0 | 400.0 |
| 15 | 1.0 | 364.0 | 41.0 | 562.0 |
| 16 | 173.5 | 85.5 | 145.5 | 563.5 |
| 17 | 11.25 | 58.25 | 8.25 | 890.25 |
| 18 | 679.25 | 5.25 | 8.25 | 275.25 |
| 19 | 583.75 | 38.75 | 239.75 | 105.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.155 | -1.182 | -1.196 | 0.799 |
| 02 | 0.858 | -1.22 | -0.007 | -1.042 |
| 03 | 0.296 | -0.631 | -0.461 | 0.4 |
| 04 | -0.087 | -1.186 | 0.921 | -1.33 |
| 05 | -0.945 | -1.631 | -4.496 | 1.225 |
| 06 | 1.08 | -0.392 | -4.496 | -0.999 |
| 07 | 1.37 | -3.752 | -4.954 | -3.331 |
| 08 | 1.363 | -4.183 | -4.954 | -2.679 |
| 09 | -4.954 | -0.316 | -4.954 | 1.181 |
| 10 | 0.738 | -4.954 | 0.637 | -4.496 |
| 11 | -4.954 | -4.954 | -3.591 | 1.376 |
| 12 | -4.954 | -4.954 | -4.954 | 1.381 |
| 13 | 0.56 | -4.954 | -1.406 | 0.692 |
| 14 | 0.515 | -4.954 | -0.398 | 0.5 |
| 15 | -4.496 | 0.406 | -1.741 | 0.839 |
| 16 | -0.33 | -1.028 | -0.504 | 0.841 |
| 17 | -2.933 | -1.402 | -3.197 | 1.297 |
| 18 | 1.028 | -3.555 | -3.197 | 0.128 |
| 19 | 0.876 | -1.795 | -0.009 | -0.819 |