Transcription factor | FOXF1 (GeneCards) | ||||||||
Model | FOXF1_HUMAN.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 11 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | nTGTTTATbWW | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 8 | ||||||||
TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
TF subfamily | FOXF {3.3.1.6} | ||||||||
HGNC | HGNC:3809 | ||||||||
EntrezGene | GeneID:2294 (SSTAR profile) | ||||||||
UniProt ID | FOXF1_HUMAN | ||||||||
UniProt AC | Q12946 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | FOXF1 expression | ||||||||
ReMap ChIP-seq dataset list | FOXF1 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 3.324 | 1.206 | 1.206 | 2.265 |
02 | 0.0 | 0.0 | 0.0 | 8.0 |
03 | 1.059 | 0.0 | 6.941 | 0.0 |
04 | 0.0 | 0.0 | 0.0 | 8.0 |
05 | 0.0 | 0.0 | 0.0 | 8.0 |
06 | 0.0 | 0.0 | 0.0 | 8.0 |
07 | 5.882 | 0.529 | 1.588 | 0.0 |
08 | 0.0 | 1.059 | 0.0 | 6.941 |
09 | 0.147 | 1.206 | 1.206 | 5.441 |
10 | 2.118 | 1.353 | 0.0 | 4.529 |
11 | 3.471 | 0.0 | 0.294 | 4.235 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.422 | -0.379 | -0.379 | 0.1 |
02 | -1.578 | -1.578 | -1.578 | 1.218 |
03 | -0.468 | -1.578 | 1.085 | -1.578 |
04 | -1.578 | -1.578 | -1.578 | 1.218 |
05 | -1.578 | -1.578 | -1.578 | 1.218 |
06 | -1.578 | -1.578 | -1.578 | 1.218 |
07 | 0.932 | -0.876 | -0.178 | -1.578 |
08 | -1.578 | -0.468 | -1.578 | 1.085 |
09 | -1.329 | -0.379 | -0.379 | 0.861 |
10 | 0.046 | -0.297 | -1.578 | 0.695 |
11 | 0.46 | -1.578 | -1.13 | 0.635 |