Model info
| Transcription factor | FOXF2 (GeneCards) | ||||||||
| Model | FOXF2_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TGTTTAChTWd | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 26 | ||||||||
| TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
| TF subfamily | FOXF {3.3.1.6} | ||||||||
| HGNC | HGNC:3810 | ||||||||
| EntrezGene | GeneID:2295 (SSTAR profile) | ||||||||
| UniProt ID | FOXF2_HUMAN | ||||||||
| UniProt AC | Q12947 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | FOXF2 expression | ||||||||
| ReMap ChIP-seq dataset list | FOXF2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.397 | 0.397 | 0.397 | 24.81 |
| 02 | 3.802 | 0.0 | 21.405 | 0.793 |
| 03 | 0.0 | 0.0 | 0.793 | 25.207 |
| 04 | 3.172 | 0.0 | 0.0 | 22.828 |
| 05 | 3.172 | 0.0 | 0.793 | 22.035 |
| 06 | 20.086 | 0.0 | 5.914 | 0.0 |
| 07 | 0.0 | 20.401 | 0.793 | 4.806 |
| 08 | 7.402 | 6.656 | 1.531 | 10.411 |
| 09 | 1.057 | 1.057 | 0.264 | 23.622 |
| 10 | 12.526 | 0.0 | 0.793 | 12.681 |
| 11 | 6.609 | 0.264 | 9.303 | 9.824 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.798 | -1.798 | -1.798 | 1.254 |
| 02 | -0.46 | -2.195 | 1.111 | -1.515 |
| 03 | -2.195 | -2.195 | -1.515 | 1.269 |
| 04 | -0.607 | -2.195 | -2.195 | 1.173 |
| 05 | -0.607 | -2.195 | -1.515 | 1.139 |
| 06 | 1.05 | -2.195 | -0.084 | -2.195 |
| 07 | -2.195 | 1.065 | -1.515 | -0.263 |
| 08 | 0.116 | 0.021 | -1.137 | 0.428 |
| 09 | -1.363 | -1.363 | -1.914 | 1.206 |
| 10 | 0.601 | -2.195 | -1.515 | 0.613 |
| 11 | 0.015 | -1.914 | 0.324 | 0.375 |