We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXH1
(GeneCards)
ModelFOXH1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
0
ConsensusWGTGKATTb
Best auROC (human)0.973
Best auROC (mouse)
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)
Aligned words487
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXH {3.3.1.8}
HGNCHGNC:3814
EntrezGeneGeneID:8928
(SSTAR profile)
UniProt IDFOXH1_HUMAN
UniProt ACO75593
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.007635
0.0005 5.94633
0.0001 7.55247
GTEx tissue expression atlas FOXH1 expression
ReMap ChIP-seq dataset list FOXH1 datasets
Motifs in JASPAR
PCM
ACGT
0164.023.026.0374.0
0212.012.0458.05.0
0311.014.018.0444.0
048.07.0415.057.0
055.010.0344.0128.0
06447.08.07.025.0
0728.028.036.0395.0
0812.028.012.0435.0
0938.0188.0209.052.0
PWM
ACGT
01-0.632-1.614-1.4991.114
02-2.208-2.2081.316-2.936
03-2.285-2.071-1.8421.285
04-2.558-2.6691.217-0.745
05-2.936-2.3681.0310.049
061.291-2.558-2.669-1.536
07-1.429-1.429-1.1891.168
08-2.208-1.429-2.2081.264
09-1.1370.430.535-0.834