We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXJ2
(GeneCards)
ModelFOXJ2_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
C
Motif rank
0
ConsensusTRTTTATYTd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words41
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXJ {3.3.1.10}
HGNCHGNC:24818
EntrezGeneGeneID:55810
(SSTAR profile)
UniProt IDFOXJ2_HUMAN
UniProt ACQ9P0K8
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.67365
0.0005 6.54547
0.0001 8.294325
GTEx tissue expression atlas FOXJ2 expression
ReMap ChIP-seq dataset list FOXJ2 datasets
Motifs in JASPAR
PCM
ACGT
010.00.9770.040.162
0212.70.026.4851.954
030.00.00.97740.162
040.00.00.041.139
050.00.00.041.139
0622.5770.018.5610.0
070.07.9240.033.215
084.8858.9010.027.353
090.00.9779.76930.393
1019.1583.4195.37313.188
PWM
ACGT
01-2.491-1.772-2.4911.299
020.195-2.4910.894-1.358
03-2.491-2.491-1.7721.299
04-2.491-2.491-2.4911.322
05-2.491-2.491-2.4911.322
060.74-2.4910.553-2.491
07-2.491-0.236-2.4911.113
08-0.657-0.132-2.4910.925
09-2.491-1.772-0.0471.027
100.583-0.947-0.5760.23