FOXJ2_HUMAN.H11MO.0.C motif - HOmo sapiens COmprehensive MOdel COllection

We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.

Model info

Transcription factor

FOXJ2
(GeneCards)

Model

FOXJ2_HUMAN.H11MO.0.C

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

10

Quality

C

Motif rank

0

Consensus

TRTTTATYTd

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

41

TF family

Forkhead box (FOX) factors {3.3.1}

TF subfamily

FOXJ {3.3.1.10}

HGNC

EntrezGene

GeneID:55810
(SSTAR profile)

UniProt ID

UniProt AC

Q9P0K8
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	5.67365
0.0005	6.54547
0.0001	8.294325

GTEx tissue expression atlas

FOXJ2 expression

ReMap ChIP-seq dataset list

Motifs in JASPAR

MA0614.1 (Foxj2; Mus musculus)

PCM

	A	C	G	T
01	0.0	0.977	0.0	40.162
02	12.7	0.0	26.485	1.954
03	0.0	0.0	0.977	40.162
04	0.0	0.0	0.0	41.139
05	0.0	0.0	0.0	41.139
06	22.577	0.0	18.561	0.0
07	0.0	7.924	0.0	33.215
08	4.885	8.901	0.0	27.353
09	0.0	0.977	9.769	30.393
10	19.158	3.419	5.373	13.188

PWM

	A	C	G	T
01	-2.491	-1.772	-2.491	1.299
02	0.195	-2.491	0.894	-1.358
03	-2.491	-2.491	-1.772	1.299
04	-2.491	-2.491	-2.491	1.322
05	-2.491	-2.491	-2.491	1.322
06	0.74	-2.491	0.553	-2.491
07	-2.491	-0.236	-2.491	1.113
08	-0.657	-0.132	-2.491	0.925
09	-2.491	-1.772	-0.047	1.027
10	0.583	-0.947	-0.576	0.23