FOXJ3_HUMAN.H11MO.0.A motif - HOmo sapiens COmprehensive MOdel COllection

Check the newest release v12

Model info

Transcription factor

FOXJ3
(GeneCards)

Model

FOXJ3_HUMAN.H11MO.0.A

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

13

Quality

A

Motif rank

0

Consensus

dTGTTTATKKTTd

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

550

TF family

Forkhead box (FOX) factors {3.3.1}

TF subfamily

FOXJ {3.3.1.10}

HGNC

EntrezGene

GeneID:22887
(SSTAR profile)

UniProt ID

UniProt AC

Q9UPW0
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	3.5534649999999997
0.0005	5.01371
0.0001	7.85277

GTEx tissue expression atlas

FOXJ3 expression

ReMap ChIP-seq dataset list

Motifs in JASPAR

MA0851.1 (Foxj3; Mus musculus)

PCM

	A	C	G	T
01	121.568	91.74	103.151	309.873
02	0.0	0.0	0.0	626.331
03	51.945	0.0	572.705	1.681
04	0.673	0.0	0.0	625.659
05	0.0	0.0	0.0	626.331
06	5.533	0.0	110.042	510.756
07	512.49	0.0	23.128	90.712
08	0.0	44.54	0.0	581.791
09	70.952	0.0	269.454	285.925
10	27.572	0.0	203.983	394.776
11	33.059	0.0	18.24	575.033
12	3.674	6.348	10.527	605.782
13	224.553	44.08	86.721	270.977

PWM

	A	C	G	T
01	-0.25	-0.527	-0.412	0.678
02	-4.588	-4.588	-4.588	1.379
03	-1.083	-4.588	1.289	-3.873
04	-4.239	-4.588	-4.588	1.378
05	-4.588	-4.588	-4.588	1.379
06	-3.098	-4.588	-0.348	1.175
07	1.179	-4.588	-1.855	-0.539
08	-4.588	-1.232	-4.588	1.305
09	-0.779	-4.588	0.539	0.598
10	-1.69	-4.588	0.262	0.919
11	-1.518	-4.588	-2.076	1.293
12	-3.399	-2.99	-2.568	1.345
13	0.357	-1.242	-0.583	0.544