FOXJ3_HUMAN.H11MO.1.B motif - HOmo sapiens COmprehensive MOdel COllection

Check the newest release v13

Model info

Transcription factor

FOXJ3
(GeneCards)

Model

FOXJ3_HUMAN.H11MO.1.B

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

13

Quality

B

Motif rank

1

Consensus

WKKTTWWTGTTTW

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

499

TF family

Forkhead box (FOX) factors {3.3.1}

TF subfamily

FOXJ {3.3.1.10}

HGNC

EntrezGene

GeneID:22887
(SSTAR profile)

UniProt ID

UniProt AC

Q9UPW0
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	3.74452
0.0005	5.00718
0.0001	8.13127

GTEx tissue expression atlas

FOXJ3 expression

ReMap ChIP-seq dataset list

Motifs in JASPAR

MA0851.1 (Foxj3; Mus musculus)

PCM

	A	C	G	T
01	77.435	61.408	75.039	399.519
02	21.321	0.0	239.525	352.554
03	18.4	0.0	316.6	278.399
04	0.0	0.0	0.0	613.4
05	33.552	0.0	70.74	509.107
06	243.403	0.0	70.746	299.251
07	218.539	47.525	0.0	347.336
08	0.0	0.0	0.0	613.4
09	100.379	0.0	513.02	0.0
10	0.0	0.0	0.0	613.4
11	0.0	0.0	0.0	613.4
12	0.0	0.0	7.776	605.623
13	396.021	64.208	71.728	81.443

PWM

	A	C	G	T
01	-0.673	-0.9	-0.704	0.951
02	-1.911	-4.57	0.442	0.827
03	-2.047	-4.57	0.72	0.592
04	-4.57	-4.57	-4.57	1.378
05	-1.483	-4.57	-0.762	1.193
06	0.458	-4.57	-0.762	0.663
07	0.351	-1.149	-4.57	0.812
08	-4.57	-4.57	-4.57	1.378
09	-0.418	-4.57	1.2	-4.57
10	-4.57	-4.57	-4.57	1.378
11	-4.57	-4.57	-4.57	1.378
12	-4.57	-4.57	-2.804	1.366
13	0.942	-0.856	-0.748	-0.624