We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXK1
(GeneCards)
ModelFOXK1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusTGTTThYhhb
Best auROC (human)0.857
Best auROC (mouse)0.781
Peak sets in benchmark (human)11
Peak sets in benchmark (mouse)4
Aligned words506
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXK {3.3.1.11}
HGNCHGNC:23480
EntrezGeneGeneID:221937
(SSTAR profile)
UniProt IDFOXK1_HUMAN
UniProt ACP85037
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.814215
0.0005 6.5601400000000005
0.0001 7.839080000000001
GTEx tissue expression atlas FOXK1 expression
ReMap ChIP-seq dataset list FOXK1 datasets
Motifs in JASPAR
PCM
ACGT
0110.04.05.0481.0
0238.010.0448.04.0
033.043.010.0444.0
041.05.050.0444.0
0510.010.083.0397.0
06246.0126.031.097.0
0712.0328.020.0140.0
08152.0117.055.0176.0
0977.0106.075.0242.0
1058.0114.072.0256.0
PWM
ACGT
01-2.394-3.126-2.9611.338
02-1.163-2.3941.268-3.126
03-3.325-1.044-2.3941.259
04-3.903-2.961-0.8981.259
05-2.394-2.394-0.4031.147
060.6710.008-1.358-0.25
07-2.2340.957-1.770.112
080.193-0.065-0.8050.339
09-0.477-0.163-0.5030.655
10-0.754-0.091-0.5430.711