Model info
| Transcription factor | Foxk1 | ||||||||
| Model | FOXK1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bbTGTTKMYnb | ||||||||
| Best auROC (human) | 0.846 | ||||||||
| Best auROC (mouse) | 0.891 | ||||||||
| Peak sets in benchmark (human) | 11 | ||||||||
| Peak sets in benchmark (mouse) | 4 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
| TF subfamily | FOXK {3.3.1.11} | ||||||||
| MGI | MGI:1347488 | ||||||||
| EntrezGene | GeneID:17425 (SSTAR profile) | ||||||||
| UniProt ID | FOXK1_MOUSE | ||||||||
| UniProt AC | P42128 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Foxk1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 34.0 | 215.0 | 153.0 | 98.0 |
| 02 | 62.0 | 148.0 | 117.0 | 173.0 |
| 03 | 19.0 | 4.0 | 7.0 | 470.0 |
| 04 | 44.0 | 6.0 | 443.0 | 7.0 |
| 05 | 8.0 | 4.0 | 9.0 | 479.0 |
| 06 | 4.0 | 8.0 | 17.0 | 471.0 |
| 07 | 5.0 | 5.0 | 147.0 | 343.0 |
| 08 | 280.0 | 114.0 | 20.0 | 86.0 |
| 09 | 6.0 | 373.0 | 24.0 | 97.0 |
| 10 | 158.0 | 102.0 | 119.0 | 121.0 |
| 11 | 64.0 | 147.0 | 93.0 | 196.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.27 | 0.537 | 0.2 | -0.24 |
| 02 | -0.689 | 0.167 | -0.065 | 0.322 |
| 03 | -1.818 | -3.126 | -2.694 | 1.315 |
| 04 | -1.022 | -2.819 | 1.256 | -2.694 |
| 05 | -2.584 | -3.126 | -2.484 | 1.334 |
| 06 | -3.126 | -2.584 | -1.92 | 1.317 |
| 07 | -2.961 | -2.961 | 0.16 | 1.002 |
| 08 | 0.8 | -0.091 | -1.77 | -0.368 |
| 09 | -2.819 | 1.085 | -1.6 | -0.25 |
| 10 | 0.232 | -0.201 | -0.049 | -0.032 |
| 11 | -0.658 | 0.16 | -0.291 | 0.445 |