We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFoxl2
ModelFOXL2_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
C
Motif rank
0
ConsensusnbnTGTTTWYhhWn
Best auROC (human)
Best auROC (mouse)0.943
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)2
Aligned words500
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXL {3.3.1.12}
MGIMGI:1349428
EntrezGeneGeneID:26927
(SSTAR profile)
UniProt IDFOXL2_MOUSE
UniProt ACO88470
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.104510000000001
0.0005 12.26831
0.0001 16.175265
GTEx tissue expression atlas Foxl2 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0113.028.052.09.019.061.09.037.010.056.049.017.010.062.039.029.0
023.017.025.07.073.040.019.075.054.040.032.023.03.020.062.07.0
032.00.02.0129.02.01.00.0114.01.02.00.0135.03.00.03.0106.0
040.00.08.00.00.00.03.00.00.00.05.00.039.02.0441.02.0
050.00.00.039.00.00.00.02.01.02.00.0454.00.00.00.02.0
060.00.00.01.00.00.00.02.00.00.00.00.00.03.00.0494.0
070.00.00.00.00.00.00.03.00.00.00.00.01.02.042.0452.0
080.00.00.01.01.00.00.01.036.05.00.01.0348.038.06.063.0
091.0211.016.0157.00.010.00.033.00.05.00.01.00.035.011.020.0
101.00.00.00.0191.019.07.044.08.03.03.013.074.046.039.052.0
1154.031.025.0164.033.04.05.026.09.05.02.033.09.025.015.060.0
1239.06.05.055.016.03.02.044.010.07.01.029.045.012.019.0207.0
1352.014.021.023.08.06.02.012.00.07.08.012.067.072.051.0145.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.86-0.1080.504-1.215-0.490.663-1.2150.167-1.1140.5780.445-0.599-1.1140.6790.219-0.074
02-2.234-0.599-0.22-1.4540.8410.244-0.490.8680.5420.2440.023-0.302-2.234-0.4390.679-1.454
03-2.584-4.4-2.5841.408-2.584-3.126-4.41.285-3.126-2.584-4.41.454-2.234-4.4-2.2341.213
04-4.4-4.4-1.328-4.4-4.4-4.4-2.234-4.4-4.4-4.4-1.77-4.40.219-2.5842.636-2.584
05-4.4-4.4-4.40.219-4.4-4.4-4.4-2.584-3.126-2.584-4.42.665-4.4-4.4-4.4-2.584
06-4.4-4.4-4.4-3.126-4.4-4.4-4.4-2.584-4.4-4.4-4.4-4.4-4.4-2.234-4.42.749
07-4.4-4.4-4.4-4.4-4.4-4.4-4.4-2.234-4.4-4.4-4.4-4.4-3.126-2.5840.2932.66
08-4.4-4.4-4.4-3.126-3.126-4.4-4.4-3.1260.14-1.77-4.4-3.1262.3990.193-1.60.695
09-3.1261.899-0.6581.604-4.4-1.114-4.40.054-4.4-1.77-4.4-3.126-4.40.112-1.022-0.439
10-3.126-4.4-4.4-4.41.8-0.49-1.4540.339-1.328-2.234-2.234-0.860.8550.3830.2190.504
110.542-0.008-0.221.6480.054-1.975-1.77-0.181-1.215-1.77-2.5840.054-1.215-0.22-0.7210.646
120.219-1.6-1.770.56-0.658-2.234-2.5840.339-1.114-1.454-3.126-0.0740.361-0.938-0.491.88
130.504-0.788-0.392-0.302-1.328-1.6-2.584-0.938-4.4-1.454-1.328-0.9380.7560.8280.4851.525