Model info
| Transcription factor | Foxl2 | ||||||||
| Model | FOXL2_MOUSE.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TGTTTWYhWWh | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.926 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 2 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
| TF subfamily | FOXL {3.3.1.12} | ||||||||
| MGI | MGI:1349428 | ||||||||
| EntrezGene | GeneID:26927 (SSTAR profile) | ||||||||
| UniProt ID | FOXL2_MOUSE | ||||||||
| UniProt AC | O88470 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Foxl2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 11.0 | 1.0 | 2.0 | 486.0 |
| 02 | 38.0 | 2.0 | 455.0 | 5.0 |
| 03 | 0.0 | 1.0 | 0.0 | 499.0 |
| 04 | 1.0 | 2.0 | 10.0 | 487.0 |
| 05 | 2.0 | 3.0 | 54.0 | 441.0 |
| 06 | 385.0 | 38.0 | 7.0 | 70.0 |
| 07 | 3.0 | 279.0 | 29.0 | 189.0 |
| 08 | 272.0 | 55.0 | 41.0 | 132.0 |
| 09 | 88.0 | 71.0 | 40.0 | 301.0 |
| 10 | 98.0 | 38.0 | 23.0 | 341.0 |
| 11 | 127.0 | 92.0 | 62.0 | 219.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.311 | -3.903 | -3.573 | 1.349 |
| 02 | -1.163 | -3.573 | 1.283 | -2.961 |
| 03 | -4.4 | -3.903 | -4.4 | 1.375 |
| 04 | -3.903 | -3.573 | -2.394 | 1.351 |
| 05 | -3.573 | -3.325 | -0.823 | 1.252 |
| 06 | 1.117 | -1.163 | -2.694 | -0.57 |
| 07 | -3.325 | 0.796 | -1.421 | 0.409 |
| 08 | 0.771 | -0.805 | -1.09 | 0.054 |
| 09 | -0.346 | -0.556 | -1.114 | 0.872 |
| 10 | -0.24 | -1.163 | -1.64 | 0.996 |
| 11 | 0.016 | -0.302 | -0.689 | 0.555 |