We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXM1
(GeneCards)
ModelFOXM1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusdnTRTTTRYhbWdn
Best auROC (human)0.906
Best auROC (mouse)
Peak sets in benchmark (human)66
Peak sets in benchmark (mouse)
Aligned words502
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXM {3.3.1.13}
HGNCHGNC:3818
EntrezGeneGeneID:2305
(SSTAR profile)
UniProt IDFOXM1_HUMAN
UniProt ACQ08050
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.32076
0.0005 13.164060000000001
0.0001 16.574965
GTEx tissue expression atlas FOXM1 expression
ReMap ChIP-seq dataset list FOXM1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0198.011.019.015.021.023.06.023.029.040.012.012.013.068.039.070.0
020.03.05.0153.01.020.03.0118.00.02.01.073.00.05.01.0114.0
030.00.01.00.013.01.016.00.00.01.09.00.0158.06.0292.02.0
041.01.02.0167.00.00.01.07.04.02.04.0308.00.00.00.02.0
050.00.00.05.00.00.01.02.00.01.01.05.02.06.017.0459.0
060.00.00.02.00.00.00.07.00.00.02.017.01.02.07.0461.0
070.01.00.00.00.01.00.01.04.01.04.00.0172.048.0244.023.0
0811.0127.03.035.07.037.00.07.035.0132.012.069.02.018.01.03.0
095.07.08.035.0102.054.013.0145.02.01.07.06.024.016.011.063.0
108.044.036.045.05.039.07.027.02.010.018.09.05.077.056.0111.0
1112.00.01.07.094.07.08.061.064.03.010.040.049.07.010.0126.0
1250.017.0104.048.02.09.03.03.05.01.020.03.021.023.0127.063.0
1314.028.020.016.09.016.07.018.056.055.071.072.018.032.036.031.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
011.137-1.02-0.488-0.719-0.39-0.3-1.598-0.3-0.0720.246-0.936-0.936-0.8580.7730.2210.802
02-4.398-2.232-1.7681.581-3.124-0.437-2.2321.322-4.398-2.582-3.1240.843-4.398-1.768-3.1241.287
03-4.398-4.398-3.124-4.398-0.858-3.124-0.656-4.398-4.398-3.124-1.213-4.3981.613-1.5982.226-2.582
04-3.124-3.124-2.5821.668-4.398-4.398-3.124-1.452-1.973-2.582-1.9732.279-4.398-4.398-4.398-2.582
05-4.398-4.398-4.398-1.768-4.398-4.398-3.124-2.582-4.398-3.124-3.124-1.768-2.582-1.598-0.5972.678
06-4.398-4.398-4.398-2.582-4.398-4.398-4.398-1.452-4.398-4.398-2.582-0.597-3.124-2.582-1.4522.682
07-4.398-3.124-4.398-4.398-4.398-3.124-4.398-3.124-1.973-3.124-1.973-4.3981.6970.4272.046-0.3
08-1.021.395-2.2320.114-1.4520.169-4.398-1.4520.1141.433-0.9360.787-2.582-0.541-3.124-2.232
09-1.768-1.452-1.3260.1141.1760.544-0.8581.527-2.582-3.124-1.452-1.598-0.258-0.656-1.020.697
10-1.3260.3410.1420.363-1.7680.221-1.452-0.142-2.582-1.112-0.541-1.213-1.7680.8960.581.261
11-0.936-4.398-3.124-1.4521.095-1.452-1.3260.6650.713-2.232-1.1120.2460.447-1.452-1.1121.387
120.467-0.5971.1960.427-2.582-1.213-2.232-2.232-1.768-3.124-0.437-2.232-0.39-0.31.3950.697
13-0.786-0.106-0.437-0.656-1.213-0.656-1.452-0.5410.580.5620.8160.83-0.5410.0250.142-0.006