Model info
| Transcription factor | Foxm1 | ||||||||
| Model | FOXM1_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TRTTTRYWbWbn | ||||||||
| Best auROC (human) | 0.882 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 66 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
| TF subfamily | FOXM {3.3.1.13} | ||||||||
| MGI | MGI:1347487 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | FOXM1_MOUSE | ||||||||
| UniProt AC | O08696 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Foxm1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 28.0 | 12.0 | 17.0 | 443.0 |
| 02 | 126.0 | 11.0 | 358.0 | 5.0 |
| 03 | 13.0 | 15.0 | 28.0 | 444.0 |
| 04 | 0.0 | 34.0 | 31.0 | 435.0 |
| 05 | 1.0 | 1.0 | 36.0 | 462.0 |
| 06 | 160.0 | 27.0 | 294.0 | 19.0 |
| 07 | 37.0 | 373.0 | 9.0 | 81.0 |
| 08 | 123.0 | 80.0 | 19.0 | 278.0 |
| 09 | 24.0 | 145.0 | 71.0 | 260.0 |
| 10 | 180.0 | 19.0 | 14.0 | 287.0 |
| 11 | 54.0 | 80.0 | 223.0 | 143.0 |
| 12 | 83.0 | 171.0 | 129.0 | 117.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.454 | -2.234 | -1.92 | 1.256 |
| 02 | 0.008 | -2.311 | 1.044 | -2.961 |
| 03 | -2.163 | -2.034 | -1.454 | 1.259 |
| 04 | -4.4 | -1.27 | -1.358 | 1.238 |
| 05 | -3.903 | -3.903 | -1.215 | 1.298 |
| 06 | 0.244 | -1.489 | 0.848 | -1.818 |
| 07 | -1.189 | 1.085 | -2.484 | -0.427 |
| 08 | -0.016 | -0.439 | -1.818 | 0.793 |
| 09 | -1.6 | 0.147 | -0.556 | 0.726 |
| 10 | 0.361 | -1.818 | -2.096 | 0.824 |
| 11 | -0.823 | -0.439 | 0.573 | 0.133 |
| 12 | -0.403 | 0.31 | 0.031 | -0.065 |