We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXO1
(GeneCards)
ModelFOXO1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnnbbbTGTTThYn
Best auROC (human)0.885
Best auROC (mouse)0.92
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)21
Aligned words364
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXO {3.3.1.15}
HGNCHGNC:3819
EntrezGeneGeneID:2308
(SSTAR profile)
UniProt IDFOXO1_HUMAN
UniProt ACQ12778
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.847760000000001
0.0005 12.481864999999999
0.0001 15.232235
GTEx tissue expression atlas FOXO1 expression
ReMap ChIP-seq dataset list FOXO1 datasets
Motifs in JASPAR
MA0480.1 (Foxo1; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0113.011.016.08.022.06.032.042.018.030.044.027.07.014.021.042.0
026.016.022.016.09.018.020.014.020.028.042.023.07.014.050.048.0
032.017.012.011.03.037.013.023.011.033.033.057.00.049.019.033.0
042.03.08.03.03.057.029.047.04.034.016.023.04.029.053.038.0
051.01.00.011.01.01.02.0119.01.01.02.0102.01.03.02.0105.0
061.00.02.01.00.00.06.00.01.00.05.00.011.09.0311.06.0
070.01.00.012.00.00.00.09.01.06.00.0317.00.00.00.07.0
080.00.01.00.00.01.01.05.00.00.00.00.06.04.059.0276.0
090.01.01.04.00.01.01.03.01.03.03.054.02.09.046.0224.0
100.00.03.00.06.01.01.06.025.03.04.019.0156.041.026.062.0
116.0140.09.032.02.031.02.010.01.026.02.05.02.045.016.024.0
124.03.02.02.076.055.042.069.07.07.010.05.014.022.024.011.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.518-0.68-0.315-0.986-0.003-1.2590.3670.636-0.20.3030.6820.199-1.113-0.445-0.0490.636
02-1.259-0.315-0.003-0.315-0.873-0.2-0.096-0.445-0.0960.2350.6360.041-1.113-0.4450.8090.768
03-2.249-0.256-0.595-0.68-1.8960.51-0.5180.041-0.680.3970.3970.939-4.1140.789-0.1470.397
04-2.249-1.896-0.986-1.896-1.8960.9390.2690.748-1.6360.427-0.3150.041-1.6360.2690.8670.537
05-2.798-2.798-4.114-0.68-2.798-2.798-2.2491.672-2.798-2.798-2.2491.518-2.798-1.896-2.2491.547
06-2.798-4.114-2.249-2.798-4.114-4.114-1.259-4.114-2.798-4.114-1.43-4.114-0.68-0.8732.631-1.259
07-4.114-2.798-4.114-0.595-4.114-4.114-4.114-0.873-2.798-1.259-4.1142.65-4.114-4.114-4.114-1.113
08-4.114-4.114-2.798-4.114-4.114-2.798-2.798-1.43-4.114-4.114-4.114-4.114-1.259-1.6360.9732.511
09-4.114-2.798-2.798-1.636-4.114-2.798-2.798-1.896-2.798-1.896-1.8960.885-2.249-0.8730.7262.303
10-4.114-4.114-1.896-4.114-1.259-2.798-2.798-1.2590.123-1.896-1.636-0.1471.9420.6120.1621.023
11-1.2591.834-0.8730.367-2.2490.335-2.249-0.772-2.7980.162-2.249-1.43-2.2490.704-0.3150.083
12-1.636-1.896-2.249-2.2491.2250.9040.6361.129-1.113-1.113-0.772-1.43-0.445-0.0030.083-0.68