We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXO1
(GeneCards)
ModelFOXO1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdbbbTGTTKhYn
Best auROC (human)0.883
Best auROC (mouse)0.901
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)21
Aligned words500
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXO {3.3.1.15}
HGNCHGNC:3819
EntrezGeneGeneID:2308
(SSTAR profile)
UniProt IDFOXO1_HUMAN
UniProt ACQ12778
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.66566
0.0005 6.439635
0.0001 7.787475
GTEx tissue expression atlas FOXO1 expression
ReMap ChIP-seq dataset list FOXO1 datasets
Motifs in JASPAR
PCM
ACGT
0193.080.0130.0197.0
0248.0155.0128.0169.0
0330.0226.0127.0117.0
0420.0239.085.0156.0
053.06.07.0484.0
0616.017.0459.08.0
072.093.08.0397.0
085.015.031.0449.0
096.020.0111.0363.0
10202.0112.026.0160.0
113.0346.026.0125.0
12113.0132.088.0167.0
PWM
ACGT
01-0.291-0.4390.0390.45
02-0.9380.2130.0230.298
03-1.3890.5870.016-0.065
04-1.770.642-0.380.219
05-3.325-2.819-2.6941.345
06-1.975-1.921.292-2.584
07-3.573-0.291-2.5841.147
08-2.961-2.034-1.3581.27
09-2.819-1.77-0.1171.058
100.475-0.108-1.5250.244
11-3.3251.01-1.5250.0
12-0.10.054-0.3460.287