We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFoxo1
ModelFOXO1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusnbbTGTTTMCn
Best auROC (human)0.878
Best auROC (mouse)0.934
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)21
Aligned words500
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXO {3.3.1.15}
MGIMGI:1890077
EntrezGeneGeneID:56458
(SSTAR profile)
UniProt IDFOXO1_MOUSE
UniProt ACQ9R1E0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.48699
0.0005 12.357215
0.0001 15.274435
GTEx tissue expression atlas Foxo1 expression
Motifs in JASPAR
MA0480.1 (Foxo1; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
012.019.036.011.013.044.034.033.026.041.058.032.08.089.038.016.0
025.010.025.09.09.083.023.078.018.065.041.042.06.026.030.030.0
033.01.01.033.05.01.02.0176.02.01.01.0115.05.01.00.0153.0
041.01.013.00.00.00.03.01.02.00.02.00.023.08.0445.01.0
051.00.02.023.00.00.01.08.02.06.03.0452.00.00.00.02.0
060.00.02.01.00.00.02.04.00.01.02.03.01.06.039.0439.0
070.00.01.00.00.01.02.04.01.05.02.037.00.02.080.0365.0
081.00.00.00.06.00.01.01.055.020.02.08.0277.057.020.052.0
090.0284.00.055.01.037.05.034.00.015.01.07.01.038.05.017.0
100.01.01.00.0136.095.053.090.00.02.08.01.017.045.036.015.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-2.584-0.490.14-1.022-0.860.3390.0830.054-0.1810.2690.6130.023-1.3281.0390.193-0.658
02-1.77-1.114-0.22-1.215-1.2150.969-0.3020.907-0.5430.7260.2690.293-1.6-0.181-0.04-0.04
03-2.234-3.126-3.1260.054-1.77-3.126-2.5841.718-2.584-3.126-3.1261.294-1.77-3.126-4.41.579
04-3.126-3.126-0.86-4.4-4.4-4.4-2.234-3.126-2.584-4.4-2.584-4.4-0.302-1.3282.645-3.126
05-3.126-4.4-2.584-0.302-4.4-4.4-3.126-1.328-2.584-1.6-2.2342.66-4.4-4.4-4.4-2.584
06-4.4-4.4-2.584-3.126-4.4-4.4-2.584-1.975-4.4-3.126-2.584-2.234-3.126-1.60.2192.631
07-4.4-4.4-3.126-4.4-4.4-3.126-2.584-1.975-3.126-1.77-2.5840.167-4.4-2.5840.9322.447
08-3.126-4.4-4.4-4.4-1.6-4.4-3.126-3.1260.56-0.439-2.584-1.3282.1710.595-0.4390.504
09-4.42.196-4.40.56-3.1260.167-1.770.083-4.4-0.721-3.126-1.454-3.1260.193-1.77-0.599
10-4.4-3.126-3.126-4.41.4611.1040.5231.05-4.4-2.584-1.328-3.126-0.5990.3610.14-0.721