We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXP1
(GeneCards)
ModelFOXP1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusbbTGTTThYnbn
Best auROC (human)0.917
Best auROC (mouse)
Peak sets in benchmark (human)21
Peak sets in benchmark (mouse)
Aligned words533
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXP {3.3.1.16}
HGNCHGNC:3823
EntrezGeneGeneID:27086
(SSTAR profile)
UniProt IDFOXP1_HUMAN
UniProt ACQ9H334
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.383385
0.0005 13.18177
0.0001 16.032155
GTEx tissue expression atlas FOXP1 expression
ReMap ChIP-seq dataset list FOXP1 datasets
Motifs in JASPAR
MA0481.1 (FOXP1; Homo sapiens)
MA0481.2 (FOXP1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
017.025.029.018.08.028.018.032.019.051.017.046.06.058.060.077.0
021.00.00.039.04.03.05.0150.01.02.00.0121.01.01.01.0170.0
032.00.05.00.01.00.05.00.00.00.06.00.032.03.0444.01.0
041.00.00.034.00.00.00.03.08.09.02.0441.00.00.00.01.0
050.03.00.06.00.00.03.06.00.00.00.02.01.012.053.0413.0
060.00.00.01.00.00.01.014.01.05.03.047.011.03.030.0383.0
072.06.02.02.02.03.02.01.010.011.05.08.0213.0125.022.085.0
085.0159.06.057.05.081.05.054.02.017.03.09.04.051.05.036.0
094.01.02.09.0116.061.027.0104.01.07.03.08.022.053.034.047.0
1022.039.030.052.020.032.010.060.015.011.011.029.09.041.031.087.0
1123.020.018.05.035.044.019.025.017.026.015.024.033.055.044.096.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.452-0.218-0.072-0.541-1.326-0.106-0.5410.025-0.4880.487-0.5970.385-1.5980.6150.6480.896
02-3.124-4.398-4.3980.221-1.973-2.232-1.7681.561-3.124-2.582-4.3981.347-3.124-3.124-3.1241.686
03-2.582-4.398-1.768-4.398-3.124-4.398-1.768-4.398-4.398-4.398-1.598-4.3980.025-2.2322.644-3.124
04-3.124-4.398-4.3980.085-4.398-4.398-4.398-2.232-1.326-1.213-2.5822.638-4.398-4.398-4.398-3.124
05-4.398-2.232-4.398-1.598-4.398-4.398-2.232-1.598-4.398-4.398-4.398-2.582-3.124-0.9360.5252.572
06-4.398-4.398-4.398-3.124-4.398-4.398-3.124-0.786-3.124-1.768-2.2320.406-1.02-2.232-0.0382.497
07-2.582-1.598-2.582-2.582-2.582-2.232-2.582-3.124-1.112-1.02-1.768-1.3261.9111.379-0.3440.995
08-1.7681.619-1.5980.597-1.7680.947-1.7680.544-2.582-0.597-2.232-1.213-1.9730.487-1.7680.142
09-1.973-3.124-2.582-1.2131.3050.665-0.1421.196-3.124-1.452-2.232-1.326-0.3440.5250.0850.406
10-0.3440.221-0.0380.506-0.4370.025-1.1120.648-0.719-1.02-1.02-0.072-1.2130.271-0.0061.018
11-0.3-0.437-0.541-1.7680.1140.341-0.488-0.218-0.597-0.179-0.719-0.2580.0560.5620.3411.116