We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXP1
(GeneCards)
ModelFOXP1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
0
ConsensusKbTGTTTMY
Best auROC (human)0.887
Best auROC (mouse)
Peak sets in benchmark (human)21
Peak sets in benchmark (mouse)
Aligned words296
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXP {3.3.1.16}
HGNCHGNC:3823
EntrezGeneGeneID:27086
(SSTAR profile)
UniProt IDFOXP1_HUMAN
UniProt ACQ9H334
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.75761
0.0005 6.5071200000000005
0.0001 8.06036
GTEx tissue expression atlas FOXP1 expression
ReMap ChIP-seq dataset list FOXP1 datasets
Motifs in JASPAR
PCM
ACGT
0117.041.052.0185.0
024.083.092.0116.0
032.06.09.0278.0
046.012.0248.029.0
050.05.017.0273.0
062.028.012.0253.0
073.04.024.0264.0
08155.0102.011.027.0
095.0143.03.0144.0
PWM
ACGT
01-1.406-0.572-0.3420.908
02-2.6290.1160.2170.446
03-3.09-2.315-1.9761.313
04-2.315-1.7231.199-0.905
05-3.968-2.46-1.4061.295
06-3.09-0.938-1.7231.219
07-2.833-2.629-1.0841.262
080.7330.319-1.8-0.973
09-2.460.653-2.8330.66