We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXP2
(GeneCards)
ModelFOXP2_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusnbbbTGTTTWYn
Best auROC (human)0.97
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words509
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXP {3.3.1.16}
HGNCHGNC:13875
EntrezGeneGeneID:93986
(SSTAR profile)
UniProt IDFOXP2_HUMAN
UniProt ACO15409
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.30597
0.0005 12.10487
0.0001 15.72654
GTEx tissue expression atlas FOXP2 expression
ReMap ChIP-seq dataset list FOXP2 datasets
Motifs in JASPAR
MA0593.1 (FOXP2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.015.027.034.025.022.031.031.016.035.032.022.016.024.040.0100.0
028.017.027.022.020.018.011.047.016.028.045.041.08.090.055.034.0
036.014.019.013.01.0102.013.037.021.049.021.047.05.031.049.059.0
040.00.00.033.02.01.03.0190.00.00.00.0102.01.01.02.0152.0
050.00.03.00.00.01.01.00.00.00.05.00.026.00.0451.00.0
060.01.00.025.00.00.00.01.02.03.01.0454.00.00.00.00.0
070.00.00.02.00.00.00.04.00.00.00.01.00.02.034.0444.0
080.00.00.00.00.01.01.00.00.01.04.029.00.01.060.0390.0
090.00.00.00.01.01.00.01.038.012.00.015.0353.019.030.017.0
101.0293.08.090.01.022.00.09.03.00.03.024.00.014.05.014.0
111.00.04.00.0137.087.016.089.00.06.07.03.012.033.047.045.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.573-0.695-0.1180.109-0.194-0.320.0180.018-0.6320.1380.049-0.32-0.632-0.2340.271.181
02-1.302-0.573-0.118-0.32-0.413-0.517-0.9960.43-0.632-0.0820.3870.295-1.3021.0760.5860.109
03-1.574-0.762-0.464-0.834-3.1011.2-0.8340.193-0.3660.471-0.3660.43-1.7440.0180.4710.656
04-4.378-4.378-4.3780.08-2.558-3.101-2.2081.821-4.378-4.378-4.3781.2-3.101-3.101-2.5581.598
05-4.378-4.378-2.208-4.378-4.378-3.101-3.101-4.378-4.378-4.378-1.744-4.378-0.155-4.3782.684-4.378
06-4.378-3.101-4.378-0.194-4.378-4.378-4.378-3.101-2.558-2.208-3.1012.691-4.378-4.378-4.378-4.378
07-4.378-4.378-4.378-2.558-4.378-4.378-4.378-1.95-4.378-4.378-4.378-3.101-4.378-2.5580.1092.668
08-4.378-4.378-4.378-4.378-4.378-3.101-3.101-4.378-4.378-3.101-1.95-0.048-4.378-3.1010.6722.539
09-4.378-4.378-4.378-4.378-3.101-3.101-4.378-3.1010.219-0.912-4.378-0.6952.439-0.464-0.014-0.573
10-3.1012.253-1.3021.076-3.101-0.32-4.378-1.189-2.208-4.378-2.208-0.234-4.378-0.762-1.744-0.762
11-3.101-4.378-1.95-4.3781.4941.042-0.6321.065-4.378-1.574-1.429-2.208-0.9120.080.430.387