Check the newest release v12
Model info
Transcription factorFOXP2
(GeneCards)
ModelFOXP2_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusnbbbTGTTTWYn
Best auROC (human)0.97
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words509
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXP {3.3.1.16}
HGNCHGNC:13875
EntrezGeneGeneID:93986
(SSTAR profile)
UniProt IDFOXP2_HUMAN
UniProt ACO15409
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.30597
0.0005 12.10487
0.0001 15.72654
GTEx tissue expression atlas FOXP2 expression
ReMap ChIP-seq dataset list FOXP2 datasets
Motifs in JASPAR
MA0593.1 (FOXP2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.015.027.034.025.022.031.031.016.035.032.022.016.024.040.0100.0
028.017.027.022.020.018.011.047.016.028.045.041.08.090.055.034.0
036.014.019.013.01.0102.013.037.021.049.021.047.05.031.049.059.0
040.00.00.033.02.01.03.0190.00.00.00.0102.01.01.02.0152.0
050.00.03.00.00.01.01.00.00.00.05.00.026.00.0451.00.0
060.01.00.025.00.00.00.01.02.03.01.0454.00.00.00.00.0
070.00.00.02.00.00.00.04.00.00.00.01.00.02.034.0444.0
080.00.00.00.00.01.01.00.00.01.04.029.00.01.060.0390.0
090.00.00.00.01.01.00.01.038.012.00.015.0353.019.030.017.0
101.0293.08.090.01.022.00.09.03.00.03.024.00.014.05.014.0
111.00.04.00.0137.087.016.089.00.06.07.03.012.033.047.045.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.573-0.695-0.1180.109-0.194-0.320.0180.018-0.6320.1380.049-0.32-0.632-0.2340.271.181
02-1.302-0.573-0.118-0.32-0.413-0.517-0.9960.43-0.632-0.0820.3870.295-1.3021.0760.5860.109
03-1.574-0.762-0.464-0.834-3.1011.2-0.8340.193-0.3660.471-0.3660.43-1.7440.0180.4710.656
04-4.378-4.378-4.3780.08-2.558-3.101-2.2081.821-4.378-4.378-4.3781.2-3.101-3.101-2.5581.598
05-4.378-4.378-2.208-4.378-4.378-3.101-3.101-4.378-4.378-4.378-1.744-4.378-0.155-4.3782.684-4.378
06-4.378-3.101-4.378-0.194-4.378-4.378-4.378-3.101-2.558-2.208-3.1012.691-4.378-4.378-4.378-4.378
07-4.378-4.378-4.378-2.558-4.378-4.378-4.378-1.95-4.378-4.378-4.378-3.101-4.378-2.5580.1092.668
08-4.378-4.378-4.378-4.378-4.378-3.101-3.101-4.378-4.378-3.101-1.95-0.048-4.378-3.1010.6722.539
09-4.378-4.378-4.378-4.378-3.101-3.101-4.378-3.1010.219-0.912-4.378-0.6952.439-0.464-0.014-0.573
10-3.1012.253-1.3021.076-3.101-0.32-4.378-1.189-2.208-4.378-2.208-0.234-4.378-0.762-1.744-0.762
11-3.101-4.378-1.95-4.3781.4941.042-0.6321.065-4.378-1.574-1.429-2.208-0.9120.080.430.387