Model info
| Transcription factor | FOXP2 (GeneCards) | ||||||||
| Model | FOXP2_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 9 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bTGTTTMCh | ||||||||
| Best auROC (human) | 0.962 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
| TF subfamily | FOXP {3.3.1.16} | ||||||||
| HGNC | HGNC:13875 | ||||||||
| EntrezGene | GeneID:93986 (SSTAR profile) | ||||||||
| UniProt ID | FOXP2_HUMAN | ||||||||
| UniProt AC | O15409 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | FOXP2 expression | ||||||||
| ReMap ChIP-seq dataset list | FOXP2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 36.0 | 200.0 | 108.0 | 156.0 |
| 02 | 3.0 | 2.0 | 7.0 | 488.0 |
| 03 | 20.0 | 4.0 | 474.0 | 2.0 |
| 04 | 3.0 | 7.0 | 6.0 | 484.0 |
| 05 | 1.0 | 5.0 | 44.0 | 450.0 |
| 06 | 0.0 | 0.0 | 87.0 | 413.0 |
| 07 | 394.0 | 50.0 | 17.0 | 39.0 |
| 08 | 4.0 | 374.0 | 15.0 | 107.0 |
| 09 | 170.0 | 145.0 | 52.0 | 133.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.215 | 0.465 | -0.144 | 0.219 |
| 02 | -3.325 | -3.573 | -2.694 | 1.353 |
| 03 | -1.77 | -3.126 | 1.324 | -3.573 |
| 04 | -3.325 | -2.694 | -2.819 | 1.345 |
| 05 | -3.903 | -2.961 | -1.022 | 1.272 |
| 06 | -4.4 | -4.4 | -0.357 | 1.187 |
| 07 | 1.14 | -0.898 | -1.92 | -1.138 |
| 08 | -3.126 | 1.088 | -2.034 | -0.153 |
| 09 | 0.304 | 0.147 | -0.86 | 0.061 |