Model info
| Transcription factor | Foxp2 | ||||||||
| Model | FOXP2_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 9 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | nTGTTTMYn | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 2075 | ||||||||
| TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
| TF subfamily | FOXP {3.3.1.16} | ||||||||
| MGI | MGI:2148705 | ||||||||
| EntrezGene | GeneID:114142 (SSTAR profile) | ||||||||
| UniProt ID | FOXP2_MOUSE | ||||||||
| UniProt AC | P58463 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Foxp2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 301.117 | 652.28 | 378.25 | 665.256 |
| 02 | 35.091 | 21.777 | 22.191 | 1917.844 |
| 03 | 246.301 | 5.269 | 1742.961 | 2.372 |
| 04 | 5.428 | 54.797 | 3.566 | 1933.112 |
| 05 | 0.0 | 2.327 | 132.861 | 1861.715 |
| 06 | 6.29 | 32.713 | 266.718 | 1691.183 |
| 07 | 1478.684 | 305.939 | 97.419 | 114.861 |
| 08 | 307.428 | 1336.253 | 25.519 | 327.704 |
| 09 | 602.545 | 367.655 | 356.413 | 670.291 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.503 | 0.267 | -0.276 | 0.286 |
| 02 | -2.606 | -3.052 | -3.035 | 1.343 |
| 03 | -0.703 | -4.247 | 1.248 | -4.765 |
| 04 | -4.225 | -2.179 | -4.518 | 1.351 |
| 05 | -5.575 | -4.775 | -1.313 | 1.313 |
| 06 | -4.114 | -2.673 | -0.624 | 1.217 |
| 07 | 1.083 | -0.487 | -1.619 | -1.457 |
| 08 | -0.482 | 0.982 | -2.906 | -0.419 |
| 09 | 0.187 | -0.305 | -0.335 | 0.294 |