We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFOXQ1
(GeneCards)
ModelFOXQ1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
C
Motif rank
0
ConsensusnRTTGTTTATKT
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words13
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXQ {3.3.1.17}
HGNCHGNC:20951
EntrezGeneGeneID:94234
(SSTAR profile)
UniProt IDFOXQ1_HUMAN
UniProt ACQ9C009
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.504205000000001
0.0005 6.369905
0.0001 8.094745
GTEx tissue expression atlas FOXQ1 expression
ReMap ChIP-seq dataset list FOXQ1 datasets
Motifs in JASPAR
PCM
ACGT
014.04.01.04.0
029.01.03.00.0
031.02.00.010.0
040.00.00.013.0
050.00.013.00.0
060.00.00.013.0
070.00.00.013.0
080.00.00.013.0
0913.00.00.00.0
100.00.01.012.0
112.00.03.08.0
120.04.00.09.0
PWM
ACGT
010.1760.176-0.8630.176
020.907-0.863-0.066-1.803
03-0.863-0.387-1.8031.006
04-1.803-1.803-1.8031.254
05-1.803-1.8031.254-1.803
06-1.803-1.803-1.8031.254
07-1.803-1.803-1.8031.254
08-1.803-1.803-1.8031.254
091.254-1.803-1.803-1.803
10-1.803-1.803-0.8631.178
11-0.387-1.803-0.0660.798
12-1.8030.176-1.8030.907