Transcription factor | Foxq1 | ||||||||
Model | FOXQ1_MOUSE.H11MO.0.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 12 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | nRTTGTTTATKT | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 13 | ||||||||
TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
TF subfamily | FOXQ {3.3.1.17} | ||||||||
MGI | MGI:1298228 | ||||||||
EntrezGene | GeneID:15220 (SSTAR profile) | ||||||||
UniProt ID | FOXQ1_MOUSE | ||||||||
UniProt AC | O70220 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Foxq1 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 4.0 | 4.0 | 1.0 | 4.0 |
02 | 9.0 | 1.0 | 3.0 | 0.0 |
03 | 1.0 | 2.0 | 0.0 | 10.0 |
04 | 0.0 | 0.0 | 0.0 | 13.0 |
05 | 0.0 | 0.0 | 13.0 | 0.0 |
06 | 0.0 | 0.0 | 0.0 | 13.0 |
07 | 0.0 | 0.0 | 0.0 | 13.0 |
08 | 0.0 | 0.0 | 0.0 | 13.0 |
09 | 13.0 | 0.0 | 0.0 | 0.0 |
10 | 0.0 | 0.0 | 1.0 | 12.0 |
11 | 2.0 | 0.0 | 3.0 | 8.0 |
12 | 0.0 | 4.0 | 0.0 | 9.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.176 | 0.176 | -0.863 | 0.176 |
02 | 0.907 | -0.863 | -0.066 | -1.803 |
03 | -0.863 | -0.387 | -1.803 | 1.006 |
04 | -1.803 | -1.803 | -1.803 | 1.254 |
05 | -1.803 | -1.803 | 1.254 | -1.803 |
06 | -1.803 | -1.803 | -1.803 | 1.254 |
07 | -1.803 | -1.803 | -1.803 | 1.254 |
08 | -1.803 | -1.803 | -1.803 | 1.254 |
09 | 1.254 | -1.803 | -1.803 | -1.803 |
10 | -1.803 | -1.803 | -0.863 | 1.178 |
11 | -0.387 | -1.803 | -0.066 | 0.798 |
12 | -1.803 | 0.176 | -1.803 | 0.907 |