Model info
| Transcription factor | FUBP1 (GeneCards) | ||||||||
| Model | FUBP1_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TYGTnhKTbKKK | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 102 | ||||||||
| TF family | |||||||||
| TF subfamily | |||||||||
| HGNC | HGNC:4004 | ||||||||
| EntrezGene | GeneID:8880 (SSTAR profile) | ||||||||
| UniProt ID | FUBP1_HUMAN | ||||||||
| UniProt AC | Q96AE4 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | FUBP1 expression | ||||||||
| ReMap ChIP-seq dataset list | FUBP1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.244 | 16.71 | 3.169 | 82.252 |
| 02 | 0.0 | 48.75 | 1.95 | 51.675 |
| 03 | 0.0 | 0.0 | 100.425 | 1.95 |
| 04 | 0.0 | 0.0 | 3.033 | 99.342 |
| 05 | 29.25 | 18.417 | 31.308 | 23.4 |
| 06 | 12.783 | 22.425 | 10.725 | 56.442 |
| 07 | 7.8 | 7.692 | 26.325 | 60.558 |
| 08 | 1.95 | 8.775 | 8.775 | 82.875 |
| 09 | 5.85 | 8.775 | 8.775 | 78.975 |
| 10 | 6.825 | 10.725 | 18.525 | 66.3 |
| 11 | 10.725 | 12.567 | 17.55 | 61.533 |
| 12 | 10.237 | 9.154 | 12.187 | 70.796 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.949 | -0.404 | -1.822 | 1.137 |
| 02 | -3.141 | 0.624 | -2.153 | 0.681 |
| 03 | -3.141 | -3.141 | 1.334 | -2.153 |
| 04 | -3.141 | -3.141 | -1.854 | 1.324 |
| 05 | 0.128 | -0.312 | 0.194 | -0.086 |
| 06 | -0.652 | -0.126 | -0.812 | 0.767 |
| 07 | -1.094 | -1.106 | 0.027 | 0.836 |
| 08 | -2.153 | -0.991 | -0.991 | 1.145 |
| 09 | -1.34 | -0.991 | -0.991 | 1.097 |
| 10 | -1.209 | -0.812 | -0.307 | 0.925 |
| 11 | -0.812 | -0.667 | -0.358 | 0.852 |
| 12 | -0.853 | -0.953 | -0.695 | 0.989 |