We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFUBP1
(GeneCards)
ModelFUBP1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
D
Motif rank
0
ConsensusTYGTnhKTbKKK
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words102
TF family
TF subfamily
HGNCHGNC:4004
EntrezGeneGeneID:8880
(SSTAR profile)
UniProt IDFUBP1_HUMAN
UniProt ACQ96AE4
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.55771
0.0005 6.316459999999999
0.0001 7.93424
GTEx tissue expression atlas FUBP1 expression
ReMap ChIP-seq dataset list FUBP1 datasets
Motifs in JASPAR
PCM
ACGT
010.24416.713.16982.252
020.048.751.9551.675
030.00.0100.4251.95
040.00.03.03399.342
0529.2518.41731.30823.4
0612.78322.42510.72556.442
077.87.69226.32560.558
081.958.7758.77582.875
095.858.7758.77578.975
106.82510.72518.52566.3
1110.72512.56717.5561.533
1210.2379.15412.18770.796
PWM
ACGT
01-2.949-0.404-1.8221.137
02-3.1410.624-2.1530.681
03-3.141-3.1411.334-2.153
04-3.141-3.141-1.8541.324
050.128-0.3120.194-0.086
06-0.652-0.126-0.8120.767
07-1.094-1.1060.0270.836
08-2.153-0.991-0.9911.145
09-1.34-0.991-0.9911.097
10-1.209-0.812-0.3070.925
11-0.812-0.667-0.3580.852
12-0.853-0.953-0.6950.989