Transcription factor | Fubp1 | ||||||||
Model | FUBP1_MOUSE.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 12 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | TYGTnhKTbKKK | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 102 | ||||||||
TF family | |||||||||
TF subfamily | |||||||||
MGI | MGI:1196294 | ||||||||
EntrezGene | GeneID:51886 (SSTAR profile) | ||||||||
UniProt ID | FUBP1_MOUSE | ||||||||
UniProt AC | Q91WJ8 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Fubp1 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 0.244 | 16.71 | 3.169 | 82.252 |
02 | 0.0 | 48.75 | 1.95 | 51.675 |
03 | 0.0 | 0.0 | 100.425 | 1.95 |
04 | 0.0 | 0.0 | 3.033 | 99.342 |
05 | 29.25 | 18.417 | 31.308 | 23.4 |
06 | 12.783 | 22.425 | 10.725 | 56.442 |
07 | 7.8 | 7.692 | 26.325 | 60.558 |
08 | 1.95 | 8.775 | 8.775 | 82.875 |
09 | 5.85 | 8.775 | 8.775 | 78.975 |
10 | 6.825 | 10.725 | 18.525 | 66.3 |
11 | 10.725 | 12.567 | 17.55 | 61.533 |
12 | 10.237 | 9.154 | 12.187 | 70.796 |
A | C | G | T | |
---|---|---|---|---|
01 | -2.949 | -0.404 | -1.822 | 1.137 |
02 | -3.141 | 0.624 | -2.153 | 0.681 |
03 | -3.141 | -3.141 | 1.334 | -2.153 |
04 | -3.141 | -3.141 | -1.854 | 1.324 |
05 | 0.128 | -0.312 | 0.194 | -0.086 |
06 | -0.652 | -0.126 | -0.812 | 0.767 |
07 | -1.094 | -1.106 | 0.027 | 0.836 |
08 | -2.153 | -0.991 | -0.991 | 1.145 |
09 | -1.34 | -0.991 | -0.991 | 1.097 |
10 | -1.209 | -0.812 | -0.307 | 0.925 |
11 | -0.812 | -0.667 | -0.358 | 0.852 |
12 | -0.853 | -0.953 | -0.695 | 0.989 |