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Model info
Transcription factorGATA1
(GeneCards)
ModelGATA1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length21
Quality
A
Motif rank
0
ConsensusnvbKbnnnnnnvAGATAAvvn
Best auROC (human)0.987
Best auROC (mouse)0.962
Peak sets in benchmark (human)48
Peak sets in benchmark (mouse)122
Aligned words500
TF familyGATA-type zinc fingers {2.2.1}
TF subfamilyTwo zinc-finger GATA factors {2.2.1.1}
HGNCHGNC:4170
EntrezGeneGeneID:2623
(SSTAR profile)
UniProt IDGATA1_HUMAN
UniProt ACP15976
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.94501
0.0005 10.45686
0.0001 15.10351
GTEx tissue expression atlas GATA1 expression
ReMap ChIP-seq dataset list GATA1 datasets
Motifs in JASPAR
MA0035.1 (Gata1; Mus musculus)
MA0140.1 (Tal1::Gata1; Mus musculus)
MA0035.2 (Gata1; Mus musculus)
MA0035.3 (Gata1; Mus musculus)
MA0140.2 (GATA1::TAL1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0123.024.035.08.031.049.06.038.020.068.038.016.011.078.045.010.0
0218.018.018.031.015.027.02.0175.05.031.016.072.02.015.044.011.0
038.02.026.04.021.05.05.060.02.08.042.028.06.012.0248.023.0
042.07.023.05.017.03.02.05.034.0102.0113.072.01.06.091.017.0
0510.09.031.04.043.028.04.043.026.066.074.063.016.016.039.028.0
0623.021.036.015.047.028.012.032.041.047.039.021.020.024.064.030.0
0737.019.054.021.034.039.010.037.039.025.061.026.015.013.044.026.0
0827.025.062.011.032.018.011.035.032.049.067.021.012.024.053.021.0
0927.021.041.014.035.032.011.038.037.054.070.032.012.018.030.028.0
1035.022.039.015.064.028.07.026.041.039.050.022.024.015.049.024.0
1121.072.060.011.015.065.011.013.037.051.050.07.04.032.044.07.0
1259.00.00.018.0142.04.00.074.0136.03.01.025.023.02.00.013.0
130.00.0360.00.00.00.09.00.00.00.01.00.00.00.0130.00.0
140.00.00.00.00.00.00.00.0500.00.00.00.00.00.00.00.0
151.01.00.0498.00.00.00.00.00.00.00.00.00.00.00.00.0
161.00.00.00.01.00.00.00.00.00.00.00.0468.01.03.026.0
17416.06.042.06.00.00.01.00.02.00.01.00.024.00.00.02.0
18103.060.0261.018.01.01.02.02.07.013.011.013.00.01.07.00.0
1929.023.052.07.043.011.09.012.083.070.0115.013.03.02.025.03.0
2050.040.045.023.054.022.05.025.069.045.062.025.04.010.013.08.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.302-0.260.112-1.328-0.0080.445-1.60.193-0.4390.7710.193-0.658-1.0220.9070.361-1.114
02-0.543-0.543-0.543-0.008-0.721-0.144-2.5841.713-1.77-0.008-0.6580.828-2.584-0.7210.339-1.022
03-1.328-2.584-0.181-1.975-0.392-1.77-1.770.646-2.584-1.3280.293-0.108-1.6-0.9382.061-0.302
04-2.584-1.454-0.302-1.77-0.599-2.234-2.584-1.770.0831.1741.2760.828-3.126-1.61.061-0.599
05-1.114-1.215-0.008-1.9750.316-0.108-1.9750.316-0.1810.7410.8550.695-0.658-0.6580.219-0.108
06-0.302-0.3920.14-0.7210.404-0.108-0.9380.0230.2690.4040.219-0.392-0.439-0.260.711-0.04
070.167-0.490.542-0.3920.0830.219-1.1140.1670.219-0.220.663-0.181-0.721-0.860.339-0.181
08-0.144-0.220.679-1.0220.023-0.543-1.0220.1120.0230.4450.756-0.392-0.938-0.260.523-0.392
09-0.144-0.3920.269-0.7880.1120.023-1.0220.1930.1670.5420.80.023-0.938-0.543-0.04-0.108
100.112-0.3460.219-0.7210.711-0.108-1.454-0.1810.2690.2190.465-0.346-0.26-0.7210.445-0.26
11-0.3920.8280.646-1.022-0.7210.726-1.022-0.860.1670.4850.465-1.454-1.9750.0230.339-1.454
120.63-4.4-4.4-0.5431.504-1.975-4.40.8551.461-2.234-3.126-0.22-0.302-2.584-4.4-0.86
13-4.4-4.42.433-4.4-4.4-4.4-1.215-4.4-4.4-4.4-3.126-4.4-4.4-4.41.416-4.4
14-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.761-4.4-4.4-4.4-4.4-4.4-4.4-4.4
15-3.126-3.126-4.42.757-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4
16-3.126-4.4-4.4-4.4-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.42.695-3.126-2.234-0.181
172.577-1.60.293-1.6-4.4-4.4-3.126-4.4-2.584-4.4-3.126-4.4-0.26-4.4-4.4-2.584
181.1840.6462.112-0.543-3.126-3.126-2.584-2.584-1.454-0.86-1.022-0.86-4.4-3.126-1.454-4.4
19-0.074-0.3020.504-1.4540.316-1.022-1.215-0.9380.9690.81.294-0.86-2.234-2.584-0.22-2.234
200.4650.2440.361-0.3020.542-0.346-1.77-0.220.7850.3610.679-0.22-1.975-1.114-0.86-1.328