We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorGATA2
(GeneCards)
ModelGATA2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusnnnnnnnnnnnnvvWGATAASvn
Best auROC (human)0.976
Best auROC (mouse)0.978
Peak sets in benchmark (human)84
Peak sets in benchmark (mouse)54
Aligned words501
TF familyGATA-type zinc fingers {2.2.1}
TF subfamilyTwo zinc-finger GATA factors {2.2.1.1}
HGNCHGNC:4171
EntrezGeneGeneID:2624
(SSTAR profile)
UniProt IDGATA2_HUMAN
UniProt ACP23769
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.979960000000002
0.0005 11.33331
0.0001 15.49361
GTEx tissue expression atlas GATA2 expression
ReMap ChIP-seq dataset list GATA2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0144.40622.66973.70410.1571.79323.5223.82741.30321.71740.81538.13128.24111.44310.92142.30915.049
0243.75721.2669.19615.14648.78617.7999.07122.2741.15450.21643.95522.6467.62624.29143.76919.058
0321.30622.18275.97721.85834.39533.2417.24938.68163.95951.12126.60724.3045.23923.13629.52721.218
0419.80615.83643.45345.80428.70121.8518.06171.06668.97714.66527.7627.95711.5817.26860.92516.288
0515.71425.4735.89651.98511.7988.8854.27244.66634.69535.25327.46242.7914.11626.241104.23116.528
0616.19511.13930.86618.12334.26227.8366.70427.04635.04150.43447.72938.65713.95916.91107.79817.301
0713.8916.64250.99717.92744.2524.6327.65529.78149.5239.18265.42538.979.1115.82354.90721.289
0817.2719.29348.67231.53535.60229.6255.82125.23251.08354.38342.11131.40722.02113.67450.46821.804
0915.81829.83551.71828.60428.12334.9072.91751.02738.15631.80250.86126.25312.34134.72152.49210.424
1020.99620.26141.76511.41735.92148.46311.735.18251.25829.1347.56130.03912.8636.27143.89423.283
1127.56931.42143.13618.90838.75130.3189.26255.79524.27433.79552.9833.8710.55220.0340.11229.228
1214.34214.2457.72514.83864.53621.5999.18920.2439.61222.30558.46725.10630.36625.39272.1439.899
1316.99455.8865.75810.22524.84635.1187.815.77130.38679.08766.27521.7785.29631.65621.95611.174
1462.090.9552.84711.62995.5054.8252.75498.657120.7027.340.98432.76340.5811.0961.19516.075
150.00.923317.0570.8990.00.014.2170.00.00.07.7790.00.00.0159.1250.0
160.00.00.00.00.9230.00.00.0496.2740.01.0250.880.8990.00.00.0
170.07.0565.256485.7840.00.00.00.00.00.00.01.0250.00.00.00.88
180.00.00.00.06.1270.00.00.9295.2560.00.00.0476.5520.881.948.316
19411.5515.56254.05316.7690.00.00.00.881.940.00.00.09.2450.00.00.0
2048.588113.82235.4524.8782.7030.9110.9880.964.90222.55223.6052.9930.01.17514.6061.867
2116.5558.65429.9011.08288.72626.00312.8910.84108.53248.36697.79719.9545.016.84616.9751.867
2261.14929.9667.4560.26452.02216.3414.89516.61254.41641.9444.03717.1728.00810.07613.821.84
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.348-0.3160.851-1.0990.825-0.28-2.0160.276-0.3590.2640.197-0.1-0.984-1.0290.3-0.718
020.333-0.3790.788-0.7110.441-0.554-1.207-0.3340.2720.470.338-0.317-1.373-0.2480.333-0.487
03-0.377-0.3380.881-0.3520.0950.061-1.4210.2110.710.487-0.159-0.248-1.727-0.296-0.056-0.381
04-0.449-0.6680.3260.378-0.084-0.352-1.320.8150.785-0.743-0.117-0.11-0.972-0.5830.662-0.64
05-0.675-0.2020.1370.504-0.954-1.227-1.9150.3530.1030.119-0.1280.311-0.78-0.1721.196-0.626
06-0.646-1.01-0.012-0.5360.091-0.114-1.495-0.1430.1130.4740.4190.21-0.791-0.6041.229-0.581
07-0.796-0.6190.485-0.5470.344-0.235-1.37-0.0480.4560.2240.7320.218-1.203-0.6690.558-0.378
08-0.583-0.4750.4390.0090.129-0.053-1.628-0.2110.4870.5490.2950.005-0.345-0.8110.475-0.355
09-0.669-0.0460.499-0.087-0.1040.109-2.2590.4860.1970.0170.482-0.172-0.910.1040.514-1.074
10-0.392-0.4270.287-0.9860.1380.434-0.9620.1170.49-0.0690.416-0.039-0.8710.1470.336-0.29
11-0.1240.0050.319-0.4940.213-0.03-1.1870.574-0.2490.0770.5230.08-1.062-0.4380.247-0.066
12-0.764-0.7710.608-0.7310.719-0.364-1.195-0.4280.235-0.3320.621-0.216-0.028-0.2050.83-1.123
13-0.5990.5760.737-1.092-0.2260.115-1.352-0.672-0.0280.9210.745-0.356-1.7170.013-0.348-1.007
140.68-3.159-2.28-0.9681.109-1.803-2.311.1411.342-1.409-3.1380.0470.258-3.059-2.995-0.653
15-4.4-3.1832.306-3.202-4.4-4.4-0.773-4.4-4.4-4.4-1.354-4.4-4.4-4.41.618-4.4
16-4.4-4.4-4.4-4.4-3.183-4.4-4.4-4.42.754-4.4-3.109-3.217-3.202-4.4-4.4-4.4
17-4.4-1.447-1.7242.732-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.109-4.4-4.4-4.4-3.217
18-4.4-4.4-4.4-4.4-1.58-4.4-4.4-3.179-1.724-4.4-4.4-4.42.713-3.217-2.609-1.291
192.567-1.6710.543-0.612-4.4-4.4-4.4-3.217-2.609-4.4-4.4-4.4-1.189-4.4-4.4-4.4
200.4371.2842.009-0.225-2.326-3.192-3.135-3.155-1.788-0.321-0.277-2.236-4.4-3.007-0.747-2.641
21-0.624-1.252-0.044-3.0691.036-0.181-0.868-1.0361.2360.4321.132-0.442-1.768-1.476-0.6-2.641
220.665-0.0420.7630.6510.505-0.637-1.79-0.6210.5490.2910.339-0.589-1.327-1.106-0.801-2.653