We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorGata3
ModelGATA3_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusndnddndbdnnvAGATAAvddnn
Best auROC (human)0.95
Best auROC (mouse)0.947
Peak sets in benchmark (human)98
Peak sets in benchmark (mouse)60
Aligned words504
TF familyGATA-type zinc fingers {2.2.1}
TF subfamilyTwo zinc-finger GATA factors {2.2.1.1}
MGIMGI:95663
EntrezGeneGeneID:14462
(SSTAR profile)
UniProt IDGATA3_MOUSE
UniProt ACP23772
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.736260000000001
0.0005 12.47871
0.0001 15.73546
GTEx tissue expression atlas Gata3 expression
Motifs in JASPAR
MA0037.1 (GATA3; Homo sapiens)
MA0037.2 (GATA3; Homo sapiens)
MA0037.3 (GATA3; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0119.1715.205108.94912.4724.47919.547.06323.1964.28824.58831.91115.71519.17610.1683.55620.539
0215.68422.65240.548.27723.79113.0310.92721.746115.13625.05673.71217.57514.88511.76524.00921.256
0333.88519.77535.72980.10630.94412.5516.21422.794100.39214.09813.0421.61621.91623.81239.55723.57
0486.3899.35564.35727.03731.98610.8827.11120.25548.93615.23217.07213.320.66524.34969.48433.588
0517.62716.64977.43976.26217.79620.8559.51611.65176.11828.85428.3624.6927.51426.0842.0118.576
0611.58811.08731.36165.01937.74218.0565.43731.20467.3121.94935.80132.26669.40816.45227.01818.302
0723.59219.18337.926105.34818.94412.4385.90530.25728.74920.1235.80514.94212.07135.48662.38736.847
0818.06710.96238.57215.75535.57113.896.79330.97333.85440.79748.0819.29122.36327.428108.95328.65
0927.93330.7432.63118.55139.86213.8816.66532.66932.13254.61889.23326.41610.01828.7826.13429.736
1031.28425.62143.4069.63368.45316.3565.88837.32328.33574.18237.4914.65627.3411.67352.59115.767
1138.07750.73455.92510.67675.43429.31515.4187.66626.97161.68234.57616.1489.53936.46329.3572.02
12134.7460.8832.72811.66399.8253.8330.074.536117.6081.9080.015.7620.5890.00.015.92
130.00.0372.7690.00.00.06.6240.00.00.02.7280.00.00.0117.8790.0
140.00.00.00.00.00.00.00.0496.0261.0042.9710.00.00.00.00.0
1595.5218.5962.985388.9231.0040.00.00.00.00.00.02.9710.00.00.00.0
1688.0053.8081.862.8528.5960.00.00.02.9850.00.00.0343.671.9151.80344.507
17348.12814.35267.87812.8993.8670.00.9350.9212.7590.9030.00.036.2640.011.0960.0
1865.066127.783184.53513.6335.6547.7690.8870.94513.928.0129.5878.4130.02.92510.8940.0
1926.45911.92537.2378.99873.5322.8149.60260.541110.30940.51755.80319.27310.790.011.1721.029
2066.53521.063.51670.03747.86414.0457.9035.44561.2720.35923.9348.250.9886.56272.4829.809
2128.3728.74132.07887.46924.63312.6815.57719.07581.85230.57432.71922.693.12671.3638.77510.275
2277.41429.2820.53110.75744.3514.3849.93874.68619.57434.70316.4078.46513.3374.95734.19417.028
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.481-0.7071.24-0.9-0.241-0.462-1.446-0.2940.715-0.2360.021-0.675-0.481-1.0980.976-0.413
02-0.677-0.3170.2560.431-0.269-0.858-1.028-0.3571.295-0.2180.851-0.566-0.728-0.957-0.26-0.38
030.08-0.4510.1320.934-0.01-0.894-1.567-0.3111.159-0.781-0.857-0.363-0.35-0.2680.233-0.278
041.009-1.1780.716-0.1430.023-1.032-1.44-0.4270.444-0.706-0.594-0.838-0.407-0.2460.7920.071
05-0.563-0.6190.90.885-0.554-0.398-1.161-0.9660.883-0.079-0.096-0.232-1.387-0.1780.293-0.512
06-0.971-1.0140.0040.7260.187-0.54-1.692-0.0010.761-0.3480.1340.0320.791-0.631-0.144-0.526
07-0.277-0.480.1911.207-0.493-0.903-1.615-0.032-0.082-0.4340.135-0.725-0.9320.1260.6850.163
08-0.539-1.0250.208-0.6730.128-0.796-1.483-0.0090.0790.2640.427-0.475-0.33-0.1291.24-0.086
09-0.111-0.0160.043-0.5130.241-0.796-1.5010.0440.0270.5531.041-0.166-1.112-0.081-0.176-0.049
100.001-0.1960.325-1.150.777-0.636-1.6180.176-0.0970.8570.18-0.743-0.132-0.9640.516-0.672
110.1950.480.577-1.0510.874-0.063-0.694-1.368-0.1450.6740.1-0.649-1.1590.153-0.062-2.575
121.452-3.214-2.318-0.9651.153-2.014-4.40.8621.316-2.623-4.4-0.673-0.411-4.4-4.4-0.663
13-4.4-4.42.468-4.4-4.4-4.4-1.507-4.4-4.4-4.4-2.318-4.4-4.4-4.41.319-4.4
14-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.753-3.124-2.243-4.4-4.4-4.4-4.4-4.4
151.109-1.259-2.2382.51-3.124-4.4-4.4-4.4-4.4-4.4-4.4-2.243-4.4-4.4-4.4-4.4
161.027-2.02-2.644-2.279-1.259-4.4-4.4-4.4-2.238-4.4-4.4-4.42.386-2.62-2.670.35
172.399-0.7640.769-0.868-2.006-4.4-3.174-3.185-2.308-3.199-4.4-4.40.147-4.4-1.013-4.4
180.7271.3991.766-0.814-1.656-1.355-3.211-3.167-0.795-0.108-0.054-1.279-4.4-2.256-1.031-4.4
19-0.164-0.9440.173-1.2150.849-0.31-1.1530.6551.2520.2570.574-0.476-1.04-4.4-1.007-3.106
200.749-0.3920.7030.80.422-0.785-1.339-1.6910.667-0.422-0.263-1.298-3.135-1.5160.834-1.132
21-0.095-0.0830.0261.021-0.235-0.884-1.668-0.4860.955-0.0220.045-0.315-2.1970.819-1.239-1.088
220.9-0.064-0.414-1.0430.346-0.762-1.120.864-0.4610.104-0.633-1.274-0.8360.8680.089-0.597