Transcription factor | Gata3 | ||||||||
Model | GATA3_MOUSE.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 13 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | dvAGATARvvdbh | ||||||||
Best auROC (human) | 0.903 | ||||||||
Best auROC (mouse) | 0.912 | ||||||||
Peak sets in benchmark (human) | 98 | ||||||||
Peak sets in benchmark (mouse) | 60 | ||||||||
Aligned words | 500 | ||||||||
TF family | GATA-type zinc fingers {2.2.1} | ||||||||
TF subfamily | Two zinc-finger GATA factors {2.2.1.1} | ||||||||
MGI | MGI:95663 | ||||||||
EntrezGene | GeneID:14462 (SSTAR profile) | ||||||||
UniProt ID | GATA3_MOUSE | ||||||||
UniProt AC | P23772 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Gata3 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 194.0 | 71.0 | 141.0 | 94.0 |
02 | 141.0 | 184.0 | 125.0 | 50.0 |
03 | 364.0 | 9.0 | 4.0 | 123.0 |
04 | 3.0 | 0.0 | 496.0 | 1.0 |
05 | 494.0 | 3.0 | 2.0 | 1.0 |
06 | 9.0 | 10.0 | 25.0 | 456.0 |
07 | 434.0 | 11.0 | 3.0 | 52.0 |
08 | 372.0 | 19.0 | 90.0 | 19.0 |
09 | 101.0 | 153.0 | 214.0 | 32.0 |
10 | 255.0 | 117.0 | 115.0 | 13.0 |
11 | 265.0 | 48.0 | 70.0 | 117.0 |
12 | 54.0 | 152.0 | 90.0 | 204.0 |
13 | 134.0 | 198.0 | 55.0 | 113.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.435 | -0.556 | 0.119 | -0.281 |
02 | 0.119 | 0.383 | 0.0 | -0.898 |
03 | 1.061 | -2.484 | -3.126 | -0.016 |
04 | -3.325 | -4.4 | 1.369 | -3.903 |
05 | 1.365 | -3.325 | -3.573 | -3.903 |
06 | -2.484 | -2.394 | -1.561 | 1.285 |
07 | 1.236 | -2.311 | -3.325 | -0.86 |
08 | 1.082 | -1.818 | -0.324 | -1.818 |
09 | -0.21 | 0.2 | 0.533 | -1.328 |
10 | 0.707 | -0.065 | -0.082 | -2.163 |
11 | 0.745 | -0.938 | -0.57 | -0.065 |
12 | -0.823 | 0.193 | -0.324 | 0.485 |
13 | 0.069 | 0.455 | -0.805 | -0.1 |