We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNR3C1
(GeneCards)
ModelGCR_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusdvhnRGdACAbnvhGKnMh
Best auROC (human)0.985
Best auROC (mouse)0.992
Peak sets in benchmark (human)143
Peak sets in benchmark (mouse)119
Aligned words466
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyGR-like receptors (NR3C) {2.1.1.1}
HGNCHGNC:7978
EntrezGeneGeneID:2908
(SSTAR profile)
UniProt IDGCR_HUMAN
UniProt ACP04150
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.358260000000001
0.0005 11.04101
0.0001 14.47211
GTEx tissue expression atlas NR3C1 expression
ReMap ChIP-seq dataset list NR3C1 datasets
Motifs in JASPAR
MA0113.1 (NR3C1; Mus musculus/Rattus norvegicus/Oncorhynchus mykiss/Gallus gallus/Homo sapiens)
MA0113.2 (NR3C1; Mus musculus)
MA0113.3 (NR3C1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.036.033.013.023.039.05.014.037.069.047.027.04.036.022.020.0
0235.027.012.07.077.060.03.040.041.036.021.09.019.021.021.013.0
0331.063.064.014.054.039.09.042.021.016.09.011.011.026.024.08.0
0438.03.074.02.098.01.021.024.040.02.057.07.015.01.056.03.0
059.01.0177.04.02.00.03.02.013.01.0186.08.00.00.035.01.0
0610.03.08.03.01.00.00.01.0205.045.0102.049.03.04.01.07.0
07201.00.016.02.050.02.00.00.0105.02.03.01.054.00.03.03.0
080.0387.013.010.00.04.00.00.01.021.00.00.00.06.00.00.0
090.01.00.00.0362.06.019.031.08.00.02.03.03.01.06.00.0
1065.076.0155.077.01.01.01.05.00.06.014.07.01.09.014.010.0
1128.08.025.06.032.023.013.024.058.047.052.027.018.032.024.025.0
1262.037.028.09.045.041.013.011.038.033.034.09.07.045.020.010.0
1321.070.010.051.047.029.01.079.031.019.012.033.06.09.01.023.0
145.04.095.01.047.010.068.02.03.02.018.01.07.07.0171.01.0
158.05.016.033.02.02.02.017.039.039.041.0233.01.01.03.00.0
1611.08.017.014.014.06.02.025.024.015.07.016.052.090.056.085.0
1721.066.07.07.014.094.02.09.018.041.06.017.017.095.013.015.0
1816.018.09.027.051.088.07.0150.03.010.07.08.04.011.016.017.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.4770.2620.176-0.739-0.180.341-1.65-0.6670.2890.9070.526-0.023-1.8550.262-0.224-0.318
020.234-0.023-0.816-1.3341.0160.768-2.1140.3660.390.262-0.27-1.094-0.368-0.27-0.27-0.739
030.1140.8170.832-0.6670.6640.341-1.0940.414-0.27-0.536-1.094-0.9-0.9-0.06-0.139-1.206
040.315-2.1140.977-2.4651.256-3.01-0.27-0.1390.366-2.4650.717-1.334-0.599-3.010.7-2.114
05-1.094-3.011.846-1.855-2.465-4.298-2.114-2.465-0.739-3.011.895-1.206-4.298-4.2980.234-3.01
06-0.992-2.114-1.206-2.114-3.01-4.298-4.298-3.011.9920.4831.2960.567-2.114-1.855-3.01-1.334
071.973-4.298-0.536-2.4650.587-2.465-4.298-4.2981.325-2.465-2.114-3.010.664-4.298-2.114-2.114
08-4.2982.627-0.739-0.992-4.298-1.855-4.298-4.298-3.01-0.27-4.298-4.298-4.298-1.479-4.298-4.298
09-4.298-3.01-4.298-4.2982.56-1.479-0.3680.114-1.206-4.298-2.465-2.114-2.114-3.01-1.479-4.298
100.8481.0031.7131.016-3.01-3.01-3.01-1.65-4.298-1.479-0.667-1.334-3.01-1.094-0.667-0.992
110.013-1.206-0.098-1.4790.145-0.18-0.739-0.1390.7350.5260.626-0.023-0.4210.145-0.139-0.098
120.8010.2890.013-1.0940.4830.39-0.739-0.90.3150.1760.205-1.094-1.3340.483-0.318-0.992
13-0.270.922-0.9920.6070.5260.048-3.011.0420.114-0.368-0.8160.176-1.479-1.094-3.01-0.18
14-1.65-1.8551.225-3.010.526-0.9920.893-2.465-2.114-2.465-0.421-3.01-1.334-1.3341.811-3.01
15-1.206-1.65-0.5360.176-2.465-2.465-2.465-0.4770.3410.3410.392.12-3.01-3.01-2.114-4.298
16-0.9-1.206-0.477-0.667-0.667-1.479-2.465-0.098-0.139-0.599-1.334-0.5360.6261.1720.71.115
17-0.270.863-1.334-1.334-0.6671.215-2.465-1.094-0.4210.39-1.479-0.477-0.4771.225-0.739-0.599
18-0.536-0.421-1.094-0.0230.6071.149-1.3341.681-2.114-0.992-1.334-1.206-1.855-0.9-0.536-0.477