Transcription factor | Nr3c1 | ||||||||
Model | GCR_MOUSE.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 15 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | RGdACAbAvWGThCY | ||||||||
Best auROC (human) | 0.978 | ||||||||
Best auROC (mouse) | 0.99 | ||||||||
Peak sets in benchmark (human) | 143 | ||||||||
Peak sets in benchmark (mouse) | 119 | ||||||||
Aligned words | 500 | ||||||||
TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
TF subfamily | GR-like receptors (NR3C) {2.1.1.1} | ||||||||
MGI | MGI:95824 | ||||||||
EntrezGene | |||||||||
UniProt ID | GCR_MOUSE | ||||||||
UniProt AC | P06537 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Nr3c1 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 233.0 | 10.0 | 202.0 | 55.0 |
02 | 34.0 | 4.0 | 422.0 | 40.0 |
03 | 175.0 | 83.0 | 158.0 | 84.0 |
04 | 431.0 | 13.0 | 12.0 | 44.0 |
05 | 0.0 | 486.0 | 9.0 | 5.0 |
06 | 409.0 | 9.0 | 25.0 | 57.0 |
07 | 76.0 | 125.0 | 202.0 | 97.0 |
08 | 315.0 | 0.0 | 185.0 | 0.0 |
09 | 189.0 | 129.0 | 150.0 | 32.0 |
10 | 83.0 | 43.0 | 21.0 | 353.0 |
11 | 11.0 | 3.0 | 483.0 | 3.0 |
12 | 27.0 | 9.0 | 16.0 | 448.0 |
13 | 81.0 | 159.0 | 70.0 | 190.0 |
14 | 27.0 | 433.0 | 2.0 | 38.0 |
15 | 54.0 | 194.0 | 17.0 | 235.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.617 | -2.394 | 0.475 | -0.805 |
02 | -1.27 | -3.126 | 1.208 | -1.114 |
03 | 0.333 | -0.403 | 0.232 | -0.392 |
04 | 1.229 | -2.163 | -2.234 | -1.022 |
05 | -4.4 | 1.349 | -2.484 | -2.961 |
06 | 1.177 | -2.484 | -1.561 | -0.771 |
07 | -0.49 | 0.0 | 0.475 | -0.25 |
08 | 0.917 | -4.4 | 0.388 | -4.4 |
09 | 0.409 | 0.031 | 0.18 | -1.328 |
10 | -0.403 | -1.044 | -1.725 | 1.03 |
11 | -2.311 | -3.325 | 1.343 | -3.325 |
12 | -1.489 | -2.484 | -1.975 | 1.268 |
13 | -0.427 | 0.238 | -0.57 | 0.415 |
14 | -1.489 | 1.234 | -3.573 | -1.163 |
15 | -0.823 | 0.435 | -1.92 | 0.626 |